result

Gene information

Detail information of Asa3G00974

Location

Gene	Chr	Start	End	Strand
Asa3G00974	chr3	266039907	266042179	-

Sequences

CDS

>Asa3G00974.1
ATGATTAAATTTGCAGCGATCATTGTGAGTGCTATATTTGGCATATCACTGCTTGCTTGTATTGGTTGTGTGTATTGCAGAGGAAAGAATATAGAACATGGAACGGATGGAGAAAATGAGCTAGAACTTCCTCTTGTTGATTTTGAAATTGTTGCAACTGCGACTGACAACTTTTCAGCTGAAAATAAACTTGGAGAAGGTGGCTTCGGCCCTGTTTATAAGGGCAAGTTTGAAGAGGGTCAAGAAATAGTAGTAAAAAGGCTTAGTAAGTCTTCACATCAAGGTGTTGATGAGTTTAAAAATGAAGTGAAACTTATTGCTAAACTTCAGCATCGAAATCTTGTTCGACTTCTTGGTTGTTGCATTCAAAGAGAAGAAAGGATGTTGATATATGAGTATTTGCCCAATAAGAGCTTAGATGCTTTTCTGTTTGGAAAGGAGGGAGATGCACTTTTGGACTGGAAGACCAGATATAGCATTATTATGGGAATTGCCCGAGGTGTTCTCTATCTTCACCATGATTCAAGATTACGAACTATCCACCGAGATCTCAAAGCAAGCAATATTCTTCTTGACAAAGATATGAACCCTAAAATATCAGACTTTGGAATGGCTAGAATTTTTGGTGGCGATGAAACAGACTTCAACACAAGAAAAATTGTTGGTTCATTTGGGTACATGTCACCTGAATACGTGTTGCAAGGAATTTTTTCAATGAAGTCTGATATATTCAGCTTTGGTGTTTTAGTTCTAGAGATCATAAGTGGGAAGAAAAATAGAGGGGTGTATGCTTTCTCCACTCGTCTAAACCTCTTATCACATATTTGGGATTTATGGAAGGAAAGTGATAGCCTGCAACTTGTGGATGAAAAAATAGTTAACAATGCTCCTGCTAATGAAATCATTAAATGTATGAAAATCGGCCTGCTATGTGTCCAGGAAAGACCAGAGAATCGTCCACTGATGCCATCTGTAATAGAAATGTTTAGCAGAGATATTACTTTACTACCAGAACCTAATCCTCCAGGGTTTGTGAGCACATCTGCTGCACTTGACTTATTAAATGTCCAAGAGCAGTTTTCTTTAAATAACTTATCAATTACTTCCTTAGGAGGTAGATAG

Protein

Gene

>Asa3G00974.1
ATGATTAAATTTGCAGCGATCATTGTGAGTGCTATATTTGGCATATCACTGCTTGCTTGTATTGGTTGTGTGTATTGCAGAGGAAAGAATATAGAACATGGTAAGGGAATTAATAGTCAAGAGCTTGGCTTTGTTTCACTATTTTTTGTTCTTcaagtatttcagacttattatttAAAGTTACTTCATTGAATGGTCAATTAGATCATAAACGAATTTTGTCTATCTACTAATATTTAGTTCTgacatgcttatttttattttacttgattttgatGTCCATCAACCAATACTTCAACTCTAACTTTAAAGGAACGGATGGAGAAAATGAGCTAGAACTTCCTCttgttgattttgaaattgttgcaACTGCGACTGACAACTTTTCAGCTGAAAATAAACTTGGAGAAGGTGGCTTCGGCCCTGTTTATAAGGTGTGTTGCTCTCTTTCAGTCGGTTGAAATGAACTTGTACCAATAGGTCGTGTATTGACCATCTTTGAGTAATCAGACATCCCTTGCACTTATAATGAGATGATACAAAGACACTGATGCATTCCATGATATCAAACTCCATAATGAACAGGGCAAGTTTGAAGAGGGTCAAGAAATAGTAGTAAAAAGGCTTAGTAAGTCTTCACATCAAGGTGTTGATGAGTTTAAAAATGAAGTGAAACTTATTGCTAAACTTCAGCATCGAAATCTTGTTCGACTTCTTGGTTGTTGCATTCAAAGAGAAGAAAGGATGTTGATATATGAGTATTTGCCCAATAAGAGCTTAGATGCTTTTCTGTttggtatgtctttactttctttAATTATGATTGATTAATGTCAAAACttacacactttgttttcatttttatatcaGTGATAGGGATTACATTTGCTAGAATTTATTTCTTTCAGGAAAGGAGGGAGATGCACTTTTGGACTGGAAGACCAGATATAGCATTATTATGGGAATTGCCCGAGGTGTTCTCTATCTTCACCATGATTCAAGATTACGAACTATCCACCGAGATCTCAAAGCAAGCAATATTCTTCTTGACAAAGATATGAACCCTAAAATATCAGACTTTGGAATGGCTAGAATTTTTGGTGGCGATGAAACAGACTTCAACACAAGAAAAATTGTTGGTTCATTGTAAGCTTTCTACAATTCTAGCCTCCAAGCAGCATACATTTTCATTTGTAcataatatatttttctatgttgtCTCTTTCAGTGGGTACATGTCACCTGAATACGTGTTGCAAGGAATTTTTTCAATGAAGTCTGATATATTCAGCTTTGGTGTTTTAGTTCTAGAGATCATAAGTGGGAAGAAAAATAGAGGGGTGTATGCTTTCTCCACTCGTCTAAACCTCTTATCACATGTAAGTAAATTTGAATTAATCTAGTTTTAGGATAATCTATTCTTACCTCAACTTTTGTCCTTCCTACCCCACTGTTTAAAATATATCACATTCCACTTTTTGCTTTTCCCATCCAGAATATAACGAAGCTATCCTtcattttacaagttcaaaaaactAACTTAATGTTAAAAATGGAATGCAAGAGGGGATGAGATCCAAAAACAATAAAACTGTAATTCGTAATTACTTCCTAATTTTTTTCATCAACTGTGATAACATTTCAGTTCAATTATAAAACGACTGTactataaattggattttgaaaaaaaaaaagatgtttaaAAAAAGTCAAATTTAAAATATGACATTATTTTCTTGTAAATCATAATTGTCTTCTGAGCAAAGTTTATTATATTCTCGTCTTATTTTACCATGGCTTTAgtgcataaaaaaattaaaaagtgaaTAGGGTAAGTTTAATAACATATAAAggcaatatttttgtttaaattttttaaatttttgtggGGTGGAAAATGCAATAAGAGGGGTGTTAATATAACTATCCATAGTTTTATCGTTAATAATAGATGACTTTGGAGTTTATTCCAGATTTGGGATTTATGGAAGGAAAGTGAtagcctgcaacttgtggatgaaAAAATAGTTAACAATGCTCCTGCTAATGAAATCATTAAATGTATGAAAATCGGCCTGCTATGTGTCCAGGAAAGACCAGAGAATCGTCCACTGATGCCATCTGTAATAGAAATGTTTAGCAGAGATATTACTTTACTACCAGAACCTAATCCTCCAGGGTTTGTGAGCACATCTGCTGCACTTGACTTATTAAATGTCCAAGAGCAGTTTTCTTTAAATAACTTATCAATTACTTCCTTAGGAGGTAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273246.1	4.6e-135	G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1
Swissprot	O81833.1	2.2e-113	S-domain-1 (SD1) receptor kinase 1
trEMBL	A0A6I9QLC7	1.6e-132	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	62.97	3e-113	405	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G00974	AT4G21380.1	316	111	2	32	344	503	815	62.97	3e-113	405
Asa3G00974	AT4G27300.1	348	144	3	27	373	470	815	57.76	4e-113	404
Asa3G00974	AT1G65800.1	317	116	2	35	344	497	813	61.20	6e-113	404

Ortholog group

Species	Genes
Allium cepa	g112745.t1; g157760.t1; g167949.t1; g167950.t1; g281083.t1; g417819.t1; g417822.t1
Allium fistulosum	AfisC3G04847; AfisC3G04970; AfisC5G03106; AfisC7G05141; AfisC7G05144
Allium sativum	Asa0G02200.1; Asa3G00974.1; Asa3G00977.1; Asa3G00979.1; Asa7G00057.1; Asa7G01017.1
Arabidopsis thaliana	AT4G05200.1; AT4G23230.1
Oryza sativa	LOC_Os01g26390.1; LOC_Os01g57510.1; LOC_Os01g57540.1; LOC_Os02g48080.1; LOC_Os04g15580.1; LOC_Os04g54190.1; LOC_Os07g30410.1; LOC_Os07g30510.1; LOC_Os07g35004.1; LOC_Os07g35260.1; LOC_Os07g35260.2; LOC_Os07g35310.1; LOC_Os07g35310.2; LOC_Os07g35370.1; LOC_Os07g35390.1; LOC_Os10g04720.1; LOC_Os10g04730.1; LOC_Os11g45540.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	60	328	174.9	1.7e-51

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network