Detail information of Asa3G01454


Location
GeneChrStartEndStrand
Asa3G01454chr3389580355389581098+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020240884.14.1e-87NAC domain-containing protein 68-like
SwissprotQ52QH4.12.6e-78OsNAC4
trEMBLA0A199V2506.8e-84NAC domain-containing protein 68

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G01720.172.783e-67 251ANAC002;ATAF1NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag242857.t1
Allium fistulosumAfisC7G04468
Allium sativumAsa3G01454.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g12340.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily713492.71.8e-26

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.