Detail information of Asa3G01666


Location
GeneChrStartEndStrand
Asa3G01666chr3448125710448126201+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020254910.11.0e-31GATA transcription factor 16-like isoform X2
SwissprotQ8LC59.28.6e-15GATA transcription factor 23
trEMBLD6MJX01.1e-22Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G49300.151.383e-1990.1GATA16GATA transcription factor 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag18777.t1
Allium fistulosumAfisC4G01260; AfisC5G04407; AfisC7G04186; AfisC8G05805
Allium sativumAsa1G00118.1; Asa2G04933.1; Asa3G01666.1; Asa6G05493.1
Arabidopsis thalianaAT5G26930.1
Oryza sativaLOC_Os03g61570.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain346864.54.2e-18

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17894GATA2; GATA-binding protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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