Detail information of Asa3G01681


Location
GeneChrStartEndStrand
Asa3G01681chr3452649525452673323+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008813049.12.3e-293auxin response factor 12-like isoform X1
SwissprotQ258Y5.12.0e-270OsARF8
trEMBLA0A8B7D4L11.6e-293Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G37020.157.810.0 854ARF8;ATARF8auxin response factor 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag12592.t1; g310582.t1; g368194.t1; g430391.t1; g486722.t1
Allium fistulosumAfisC4G03920; AfisC5G07026; AfisC7G04154; AfisC8G04152
Allium sativumAsa0G02535.1; Asa3G01681.1; Asa4G03108.1
Arabidopsis thalianaAT1G30330.1; AT1G30330.2; AT5G37020.1; AT5G37020.2
Oryza sativaLOC_Os02g06910.1; LOC_Os04g57610.1; LOC_Os04g57610.3; LOC_Os06g46410.1; LOC_Os06g46410.2; LOC_Os12g41950.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family12422574.44.7e-21
PF06507.10Auxin_respFamily250333114.51.7e-33

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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