Detail information of Asa3G01996


Location
GeneChrStartEndStrand
Asa3G01996chr3539960767539970372+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK59928.11.9e-38uncharacterized protein A4U43_C08F12390
SwissprotQ05024.14.3e-11Protein TRI1
trEMBLA0A8K0NBD65.4e-35SWI/SNF complex component SNF12

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G34290.156.911e-32 135SWIB/MDM2 domain superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag173107.t1; g465741.t1
Allium fistulosumAfisC2G07560; AfisC5G00564
Allium sativumAsa3G01996.1; Asa4G03143.1
Arabidopsis thalianaAT2G14880.1; AT4G34290.1
Oryza sativaLOC_Os03g55310.1; LOC_Os12g32280.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02201.15SWIBDomain6213396.74.9e-28

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15223UAF30, SPP27; upstream activation factor subunit UAF30EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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