result

Gene information

Detail information of Asa3G02043

Location

Gene	Chr	Start	End	Strand
Asa3G02043	chr3	555238786	555240465	-

Sequences

CDS

>Asa3G02043.1
ATGAGACCATCCTCATCCTCCGTTGTCTGCAGAGAGGATTCGATTCCCGATGATCGACGAGCCGTCTCCAAGAGAACCCTACCTCTCATCAGAGCCCACCACCCCCGCATTCCCCACCCTACTCCCAGAAAGCGAGCAAACCCTCGATCCAACAACCTCCAGCGCATCTCCTACGTCCCGCCCCACGAGGAAATCAGGTTCCGCAATGAGGTACGTGAGACCCGCATCATTTACGAATCCCTCCGAATACACCTGTCCCTTCCGTCCTCGGATCCGAAACCCGTTTGGAGAGCCGACATGATTGCGGGTTCCATGATGTCCGATCACAACCTCTGGCTCAACCGCGAGAGACGCATCATCGGATCCCTCCCTGGCATCTCAATTGGCGACGTCTTCTTCTACCGAATGGAAATGTGCGTCCTTGGCCTCCATGGCCAAGTCCAAGCCGGAATAGACTCGATACCAGCCAGCCAGTCGCCCGAGGGAGGCCCTCTAGCCACCAGCATCGTCATCAGCGGTGGATACGAGGACGACGTTGATAAAGGTGATGTAGTCTTTTACACCGGCCATGGTGGTAAAGAGAACAAGAATGTCACCAAGCAGGCAGCAGATCAGAAGCTTGAAGGCAGCAACCTCGCTCTGGAAAATAGCCGCTTTAACAATATCGAAGTCAGATTAATCCGAGGATTTGACTACCCGCAAAGCCCTAGCAAGCGGATCTATGTGTATGACGGACTTTACGAAGTTAAAGAACGCAATTTCGAGCGAGGGAGATCCGGATTTTATGTGCACAGATTCATGCTTGTTAGAAAGGAAGGGCAGGCAAGATTAGGAAGTGAGGTCTTAGAATTGGCCGAGAAACTGAAATCATTTGACAGTCAACGAAACAGAAAAGACGGGTACATAGAGTATGATATTTCAAAAGGGAAGGAAAGGTTTCCGATATCGGCTTTCAACGACATTGACGATGAGTGTTATCCATTGAAATGTGAGTATTTGGTGAAGTCAACTTTTAAGTCGGTTTTGATGAAGGACGTCGTTGGAAATGGGTGTGCATGTCAAGGACAGTGTAAGCTGAACGAGTGTTCTTGTTTAGAGAAGAATGGAGGAGAGCTAGTGTATGATGGTAACGGGAAATTGATCAAGGGAAAGCCAATTATATACGAGTGTGGCAAGCATTGCAGGTGCAGTACAAACTGTGGAAATAGAATTAGTGATAGGGGATTAAAGCACAGGCTCGAGATATTCAGATCGGATGTGACGGAGTGGGGAGTGAGGTCATTAGACTTGATATGTGCTGGCGAGTTTGTATGCGAAATCAGCGGGGTGATTTTAACGCAGAAGGAAGGGGAGGCGGCGGATAGATTACAGAGGGCACTGATACATCCACAGAAGTTTCCAGAAAGGTGGAGAGAGTGGGGGAACTTATTAAAGTTTGGGTATGGGAGCAGTTTGGGAGATGATATGGACATGGATGATCTTGGCTATGTTATAGATGTTACGACTTCGAGGAATGTGGGGTGTTATATCAGTCATAGTTTAACTCCAAATGTGTTCGTGCAGTATGTACTGAACAATCATTACGATAAGAGGTATCCGAGACTGATGGTGTTTGCTATGGAGAACATACCACCATTGAGGGAGCTGAGCTTGGACTATGGAGACGTAGAGGTAGGTTAG

Protein

Gene

>Asa3G02043.1
atgAGACCATCCTCATCCTCCGTTGTCTGCAGAGAGGATTCGATTCCCGATGATCGACGAGCCGTCTCCAAGAGAACCCTACCTCTCATCAGAGCCCACCACCCCCGCATTCCCCACCCTACTCCCAGAAAGCGAGCAAACCCTCGATCCAACAACCTCCAGCGCATCTCCTACGTCCCGCCCCACGAGGAAATCAGGTTCCGCAATGAGGTACGTGAGACCCGCATCATTTACGAATCCCTCCGAATACACCTGTCCCTTCCGTCCTCGGATCCGAAACCCGTTTGGAGAGCCGACATGATTGCGGGTTCCATGATGTCCGATCACAACCTCTGGCTCAACCGCGAGAGACGCATCATCGGATCCCTCCCTGGCATCTCAATTGGCGACGTCTTCTTCTACCGAATGGAAATGTGCGTCCTTGGCCTCCATGGCCAAGTCCAAGCCGGAATAGACTCGATACCAGCCAGCCAGTCGCCCGAGGGAGGCCCTCTAGCCACCAGCATCGTCATCAGCGGTGGATACGAGGACGACGTTGATAAAGGTGATGTAGTCTTTTACACCGGCCATGGTGGTAAAGAGAACAAGAATGTCACCAAGCAGGCAGCAGATCAGAAGCTTGAAGGCAGCAACCTCGCTCTGGAAAATAGCCGCTTTAACAATATCGAAGTCAGATTAATCCGAGGATTTGACTACCCGCAAAGCCCTAGCAAGCGGATCTATGTGTATGACGGACTTTACGAAGTTAAAGAACGCAATTTCGAGCGAGGGAGATCCGGATTTTATGTGCACAGATTCATGCTTGTTAGAAAGGAAGGGCAGGCAAGATTAGGAAGTGAGGTCTTAGAATTGGCCGAGAAACTGAAATCATTTGACAGTCAACGAAACAGAAAAGACGGGTACATAGAGTATGATATTTCAAAAGGGAAGGAAAGGTTTCCGATATCGGCTTTCAACGACATTGACGATGAGTGTTATCCATTGAAATGTGAGTATTTGGTGAAGTCAACTTTTAAGTCGGTTTTGATGAAGGACGTCGTTGGAAATGGGTGTGCATGTCAAGGACAGTGTAAGCTGAACGAGTGTTCTTGTTTAGAGAAGAATGGAGGAGAGCTAGTGTATGATGGTAACGGGAAATTGATCAAGGGAAAGCCAATTATATACGAGTGTGGCAAGCATTGCAGGTGCAGTACAAACTGTGGAAATAGAATTAGTGATAGGGGATTAAAGCACAGGCTCGAGATATTCAGATCGGATGTGACGGAGTGGGGAGTGAGGTCATTAGACTTGATATGTGCTGGCGAGTTTGTATGCGAAATCAGCGGGGTGATTTTAACGCAGAAGGAAGGGGAGGCGGCGGATAGATTACAGAGGGCACTGATACATCCACAGAAGTTTCCAGAAAGGTGGAGAGAGTGGGGGAACTTATTAAAGTTTGGGTATGGGAGCAGTTTGGGAGATGATATGGACATGGATGATCTTGGCTATGTTATAGATGTTACGACTTCgaggaatgtggggtgttatatCAGTCATAGTTTAACTCCAAATGTGTTCGTGCAGTATGTACTGAACAATCATTACGATAAGAGGTATCCGAGACTGATGGTGTTTGCTATGGAGAACATACCACCATTGAGGGAGCTGAGCTTGGACTATGGAGACGTAGAGGTAGGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	RWW08494.1	6.1e-147	hypothetical protein GW17_00028058
Swissprot	Q9T0G7.1	1.2e-134	Suppressor of variegation 3-9 homolog protein 9
trEMBL	A0A835EJN7	4.4e-147	Histone-lysine N-methyltransferase family member SUVH9

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13460.1	47.82	8e-139	491	SDG22;SET22;SUVH9	SU(VAR)3-9 homolog 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G02043	AT4G13460.2	527	261	7	41	557	118	640	47.82	8e-139	491
Asa3G02043	AT4G13460.1	527	261	7	41	557	118	640	47.82	8e-139	491
Asa3G02043	AT2G33290.1	513	269	5	49	554	130	638	45.42	1e-131	467

Ortholog group

Species	Genes
Allium cepa	g120020.t1
Allium fistulosum	AfisC7G03915
Allium sativum	Asa3G01535.1; Asa3G02043.1; Asa3G02044.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02182.14	SAD_SRA	Domain	120	274	146.2	5.3e-43
PF05033.13	Pre-SET	Family	306	403	61.3	1e-16
PF00856.25	SET	Family	423	554	41.9	1.2e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0042393	F	histone binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0034968	P	histone lysine methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Lysine degradation	ko00310
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network