Detail information of Asa3G02252


Location
GeneChrStartEndStrand
Asa3G02252chr3614496289614511947-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008812302.11.4e-182tubby-like F-box protein 6
SwissprotQ10LG8.11.9e-163Tubby-like F-box protein 14
trEMBLA0A8B7D3B91.0e-182Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47900.168.952e-158 555AtTLP3;TLP3tubby like protein 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag438407.t1
Allium fistulosumAfisC7G03373
Allium sativumAsa3G02252.1
Arabidopsis thalianaAT2G47900.1; AT2G47900.2; AT2G47900.3; AT3G06380.1; AT5G18680.1
Oryza sativaLOC_Os03g22800.1; LOC_Os03g22800.2; LOC_Os03g22800.3; LOC_Os07g47110.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain449630.52.1e-07
PF01167.15TubDomain109392313.66.3e-94

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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