Detail information of Asa3G02300


Location
GeneChrStartEndStrand
Asa3G02300chr3623424096623467374+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276907.19.6e-286lysine-specific demethylase JMJ25-like isoform X2
SwissprotQ9SSE9.11.6e-157Protein JUMONJI 25
trEMBLA0A8B7CNS11.6e-279lysine-specific demethylase JMJ25-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G62310.148.881e-151 534transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag255533.t1; g459650.t1; g532603.t1; g86967.t1
Allium fistulosumAfisC1G04398; AfisC2G07390; AfisC7G02477; AfisC7G03329
Allium sativumAsa3G02300.1; Asa3G02916.1; Asa3G02918.1; Asa6G05198.1
Arabidopsis thalianaAT1G11950.1; AT1G62310.1
Oryza sativaLOC_Os02g01940.1; LOC_Os02g58210.1; LOC_Os02g58210.2; LOC_Os03g31594.1; LOC_Os03g31594.2; LOC_Os09g22040.1; LOC_Os09g22540.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08879.7WRCDomain124850.21.5e-13
PF10497.6zf-4CXXC_R1Domain21528026.35.8e-06
PF02373.19JmjCDomain1086118250.22.7e-13

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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