Detail information of Asa3G02536


Location
GeneChrStartEndStrand
Asa3G02536chr3700869401700876339+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265075.17.9e-140zinc finger CCCH domain-containing protein 8
SwissprotQ941Q3.11.5e-106ENHANCER OF AG-4 protein 1
trEMBLA0A5P1F0H05.7e-140Zinc finger CCCH domain-containing protein 37

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G12680.154.392e-129 459HUA1floral homeotic protein (HUA1)

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag50210.t1
Allium fistulosumAfisC5G02394
Allium sativumAsa3G01842.1; Asa3G02536.1
Arabidopsis thalianaAT3G12680.1
Oryza sativaLOC_Os01g42970.1; LOC_Os01g42970.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily11814331.01.5e-07
PF00642.21zf-CCCHFamily17019531.31.2e-07
PF00642.21zf-CCCHFamily21824336.43e-09
PF00642.21zf-CCCHFamily28230631.98e-08
PF00642.21zf-CCCHFamily36438836.13.7e-09
PF00642.21zf-CCCHFamily42444724.71.5e-05

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03260EIF4G; translation initiation factor 4GEC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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