Detail information of Asa3G03295


Location
GeneChrStartEndStrand
Asa3G03295chr3900968153900985379+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_006652961.11.6e-41PREDICTED: mediator of RNA polymerase II transcription subunit 7a-like
SwissprotQ9LYW3.12.3e-34Mediator of RNA polymerase II transcription subunit 7a
trEMBLA0A8S0PT163.9e-42Mediator of RNA polymerase II transcription subunit 7

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03500.174.144e-45 177Mediator complex, subunit Med7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag369402.t1
Allium fistulosumAfisC7G03372
Allium sativumAsa3G03295.1
Arabidopsis thalianaAT5G03220.1; AT5G03500.1; AT5G03500.2; AT5G03500.3
Oryza sativaLOC_Os04g56640.1; LOC_Os04g56640.2; LOC_Os04g56640.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05983.8Med7Family7131116.01.9e-33

Gene Ontology
AccessionOntologyName
GO:0001104FRNA polymerase II transcription cofactor activity
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0016592Cmediator complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15148MED7; mediator of RNA polymerase II transcription subunit 7EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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