Detail information of Asa3G03443


Location
GeneChrStartEndStrand
Asa3G03443chr3942057348942065942+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245416.14.2e-40protein LHY-like isoform X1
SwissprotQ6R0H1.27.8e-15Protein LATE ELONGATED HYPOCOTYL
trEMBLA0A5P1FU393.0e-40Protein LHY

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46830.136.925e-2199.0AtCCA1;CCA1circadian clock associated 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag412059.t1; g61981.t1
Allium fistulosumAfisC2G00978
Allium sativumAsa3G03443.1; Asa7G01587.1
Arabidopsis thalianaAT1G01060.1; AT1G01060.2; AT1G01060.3; AT1G01060.4; AT1G01060.5
Oryza sativaLOC_Os08g06110.2; LOC_Os08g06110.3; LOC_Os08g06110.4; LOC_Os08g06110.5

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12133LHY; MYB-related transcription factor LHYEC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.