Detail information of Asa3G03564


Location
GeneChrStartEndStrand
Asa3G03564chr3978621003978622105-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOVA08555.11.5e-54zinc finger protein
SwissprotO82632.11.4e-46GATA transcription factor 9
trEMBLA0A200QDS81.1e-54GATA transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32890.144.632e-58 223GATA9GATA transcription factor 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag175187.t1; g175189.t1; g523096.t1
Allium fistulosumAfisC7G01600
Allium sativumAsa3G03564.1
Arabidopsis thalianaAT4G32890.1; AT5G25830.1
Oryza sativaLOC_Os01g54210.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain20523957.75.9e-16

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17894GATA2; GATA-binding protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.