Detail information of Asa3G03621


Location
GeneChrStartEndStrand
Asa3G03621chr3997008812997009402-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010916419.16.2e-30zinc finger protein GIS3-like
SwissprotQ9C9H1.13.3e-28Protein GLABROUS INFLORESCENCE STEMS 3
trEMBLA0A8B9AER81.9e-33zinc finger protein GIS3-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68360.142.509e-30 126C2H2 and C2HC zinc fingers superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag251050.t1; g299254.t1; g432884.t1; g432885.t1
Allium fistulosumAfisC6G00174; AfisC6G04209; AfisC7G01520
Allium sativumAsa0G02901.1; Asa2G02108.1; Asa2G04272.1; Asa3G03621.1; Asa8G03153.1; Asa8G05848.1
Arabidopsis thalianaAT1G10480.1; AT1G67030.1; AT1G68360.1
Oryza sativaLOC_Os01g04120.1; LOC_Os01g32920.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain477125.39.4e-06

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10773NTH; endonuclease IIIEC:4.2.99.18 Base excision repairko03410

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.