Detail information of Asa3G03846


Location
GeneChrStartEndStrand
Asa3G03846chr310550213791055023059+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAPL97765.12.3e-124COL1
SwissprotQ9SSE5.19.1e-70Zinc finger protein CONSTANS-LIKE 9
trEMBLA0A1L5BWP41.6e-124COL1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G07650.148.543e-98 355BBX7;COL9CONSTANS-like 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag435375.t1; g468242.t1
Allium fistulosumAfisC6G04046; AfisC7G01252
Allium sativumAsa3G03846.1; Asa8G03016.1
Arabidopsis thalianaAT3G07650.1; AT3G07650.2; AT3G07650.3; AT3G07650.4; AT5G48250.1
Oryza sativaLOC_Os02g49230.1; LOC_Os02g49230.2; LOC_Os02g49230.3; LOC_Os02g49230.4; LOC_Os02g49230.5; LOC_Os02g49230.6; LOC_Os06g19444.1; LOC_Os06g19444.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00643.21zf-B_boxDomain469023.54e-05
PF06203.11CCTMotif33537758.54.4e-16

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12135CO; zinc finger protein CONSTANSEC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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