Detail information of Asa3G03954


Location
GeneChrStartEndStrand
Asa3G03954chr310827410921082743847+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020268207.11.1e-82zinc finger protein WIP2-like
SwissprotQ9SVY1.14.1e-79WIP-domain protein 2
trEMBLA0A5P1ER811.1e-81C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G57670.190.853e-76 280NTT;WIP2C2H2-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag143178.t1; g204286.t1
Allium fistulosumAfisC4G01382; AfisC7G01153
Allium sativumAsa3G03954.1; Asa4G01272.1
Arabidopsis thalianaAT1G51220.1; AT3G57670.1
Oryza sativaLOC_Os06g40960.1; LOC_Os09g10980.1; LOC_Os09g31140.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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