Detail information of Asa3G04007


Location
GeneChrStartEndStrand
Asa3G04007chr311034165191103417280+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010940962.11.6e-67dehydration-responsive element-binding protein 2E-like
SwissprotQ10R18.11.7e-53Dehydration-responsive element-binding protein 2E
trEMBLA0A6I9SCF31.2e-67dehydration-responsive element-binding protein 2E-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G57600.143.771e-54 209Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag502535.t1
Allium fistulosumAfisC5G04623
Allium sativumAsa3G04007.1
Arabidopsis thalianaAT3G57600.1
Oryza sativaLOC_Os03g07830.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain338249.53.4e-13

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.