Detail information of Asa3G04941


Location
GeneChrStartEndStrand
Asa3G04941chr313733433391373350281-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_002964954.29.3e-19probable cytosolic oligopeptidase A isoform X2
SwissprotQ94AM1.14.8e-20Zincin-like metalloproteases family protein 1
trEMBLD8R0T96.7e-19oligopeptidase A

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G65620.180.705e-22 101OOP;TOP1Zincin-like metalloproteases family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag256502.t1; g256515.t1; g344199.t1; g344213.t1; g344220.t1
Allium fistulosumAfisC1G01158; AfisC1G01622; AfisC1G02233; AfisC3G05597; AfisC5G02205; AfisC5G04490; AfisC6G04155; AfisC7G06136; AfisC7G06138; AfisC7G06143; AfisC7G06151; AfisC7G06152; AfisC7G06156
Allium sativumAsa3G00235.1; Asa3G04941.1; Asa6G04717.1
Arabidopsis thalianaAT1G30135.1; AT2G34600.1; AT3G22275.1
Oryza sativaLOC_Os07g05830.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01432.17Peptidase_M3Family26054.41.2e-14
PF06200.11tifyDomain12715633.61.5e-08
PF09425.7CCT_2Motif18520728.01.3e-06

Gene Ontology
AccessionOntologyName
GO:0004222Fmetalloendopeptidase activity
GO:0006508Pproteolysis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01414prlC; oligopeptidase AEC:3.4.24.70 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.