Detail information of Asa4G00289
| Gene | Chr | Start | End | Strand |
|---|
| Asa4G00289 | chr4 | 86166222 | 86167267 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_030453376.1 | 1.5e-26 | CCR4-NOT transcription complex subunit 9-like |
| Swissprot | Q92368.1 | 2.6e-20 | Cell differentiation protein rcd1 |
| trEMBL | A0A059BMQ9 | 1.1e-26 | CCR4-NOT transcription complex subunit 9 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G20800.1 | 46.88 | 9e-29 | 122 | | Cell differentiation, Rcd1-like protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa4G00289 | AT3G20800.1 | 160 | 71 | 4 | 7 | 153 | 158 | 316 | 46.88 | 9e-29 | 122 |
| Asa4G00289 | AT5G12980.1 | 156 | 66 | 3 | 7 | 149 | 154 | 309 | 49.36 | 1e-27 | 118 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF04078.10 | Rcd1 | Family | 6 | 50 | 60.5 | 1.3e-16 |
| PF04078.10 | Rcd1 | Family | 89 | 134 | 32.5 | 4.7e-08 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K12606 | RCD1, CNOT9, CAF40; CCR4-NOT transcription complex subunit 9 | EC:- | RNA degradation | ko03018 |