result

Gene information

Detail information of Asa4G00442

Location

Gene	Chr	Start	End	Strand
Asa4G00442	chr4	129526825	129529002	+

Sequences

CDS

Protein

Gene

>Asa4G00442.1
TACACTTTTCCTTGAAAACAATTCTTTGTTTGGACCAATTCCTGATTTGAAACTTCAAAAGCTAAACCATTTGAACTTTAGTTACAACAAATTAAACGGTACAATACCCCTTTCCCTTCAAAGATTTTCAAATGATTCGTTTGTTGGAAATATTCAACTGTGTGGCCCTCCTCTACTTCAGTGTTCTGGTGTTCATCCTTCACCGttatcacctaattcttcttcgcAACCTTCGTTTCCTCGTAATAATGAAGTTAGTTCGACAAagaagttaaaaacaagggttattATAGTGATAATTGCTGGTGGAGTTGCTTTGTTCTTACTAGTGGCTGTTGTCCTTGTACTGTGCATAATAAGAAAGAAAAGCAAGGGAGGGGTTATGGGTTCAACGACGAAAACTTTCAGCAACAAAAATGTTGAGTCATCAAACGGGGATTATAGCAGTGGAGTTCAAATGGCGGAGAAGAATAAACTGGTATTTTTCGAGGGGTGTTCGTACAATTTTGATCTGGAAGATCTGTTAAGGGCTTCGGCCGAAGTTCTTGGAAAAGGAAGCTATGGAACAACTTATAAAGCAGCTCTCGAGGATGGAGTAACGGTTGTGGTGAAAAGATTGAAGGAAGTTATGGCAGGTAAGAAAGAATTTGAACAGCAAATGGAAAGCATTAATAGAGTTGGGCAACATCAGAACCTGGTCTCTATAAGAGCTTATTATTACTCGAAGGATGAAAAGCTTATTGTATATGAATATGCTACTCATGGAAGCTTCTCTTCGTTGTTGCATGGTATATTTTTTTCTATCTCTCCATTCTCAAGTTTAAAGAATACAATAACATAGTCGCTGAACTCGCAACATAGGGATTTTACTTTGTAGAGATTAGTGAGGCATCCTTATTTTCCAAACTTATTTCGTTTTTGCTTGCTTCAAAAACTAGTTTTTACCAAAAACTCCCCCGGGCCAAAAGAAAATGCAAATGTGTTCCTTTTTTAGCAAATTGCAAACAGATTTGCACTATATTTTCTGCAAACTTTTCCAGAAAACACAAATTTTCACTAGGAGTAATCATAGGATGTTTTGTGAAATTGTTTTTTGAAGAGAGTAAAAGTGTATTTTTAAACATCAGAAGAGTGCCTgcgaaattttttcttttaattgtcTAGTATAGACCCGAAACAACTAGATCAATTGCATTTAACAACTATCTGGCATATCGAGTTTCCAGTAATTAGATATATTTTGCACTATGATGGCGTAAGCTTGTGCATGTGCACTTTTAACCTGTTCTTGGCTTCGGAAAGATTAACAAAATCTGACATACATAGGTAGTGCAACTGGTTGAAGTAGTTGGTTTCCACTGATAAGATTGAGAGCTTGATCATTACTAGCTGCACTACATATGAATATACCTAGATTATGGTCTGCGGCATACACAATACATGATTATATTTATTGCTAATACTAAAATTAGTATtatgtagaaaatatattatataaccgaAAATATTATatgtaactattttttttttatatatatatgcactaagcttttttctttctttctaggaAACCGTGGAACCGACGCAAGAACTCCATTAAACTGGGAAGCACGTCTAAAAATACTGTTATCGACCGCAAAAGCCATACTTCACATCCACTCCGAACAAAACCCAAAATTCACACATGGAAACATAAAATCATCGAACATCCTCATGACCGATAACCTCACCCCCATTATCTCCGATTACGCGCTAGCTCCACTGATGAACAACCTACCATCCTCGACGTCTCGATCCCTGCCTGGATACCGTGCACCTGAGTTCGTCGAGACATCCAAACTCACCACCAAAACCGATGTTTACAGCTTCGGCGTTGTGATATTGGAAGCTTTAACGGGTAAATCTCCGGTTCAAGGGCATGGGTACGACGACGTGTCCGATTTGCCGAGGTGGGTGCACTCGGTCGTCAGAGAGGAATGGACTGCTGAGGTGTTTGATGTTGAGTTAATGAAGGGTGAGAATATCGAGGAGGATATGGTGCATATGTTGCAACTGGGGTTGGCTTGTTCTTCTAGGGATCCGAACAAGAGGCCGAGTATGACGGAGGTTGTGAGGATGATGGAGGAGATTAGACGGGTTGATTCGGAAAGTACACCGACTTCTGAAATTGAAGTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267574.1	1.1e-133	probable inactive receptor kinase At5g58300
Swissprot	Q9LVM0.1	4.6e-113	Probable inactive receptor kinase At5g58300
trEMBL	A0A453I667	4.3e-132	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58300.1	57.88	2e-140	495		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G00442	AT5G58300.2	463	186	6	2	462	187	642	57.88	2e-140	495
Asa4G00442	AT5G58300.1	463	186	6	2	462	187	642	57.88	2e-140	495
Asa4G00442	AT3G08680.2	453	200	6	2	451	167	615	54.30	6e-134	474

Ortholog group

Species	Genes
Allium cepa	g492171.t1
Allium fistulosum	AfisC4G00379
Allium sativum	Asa4G00442.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	179	445	124.9	3.3e-36

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network