result

Gene information

Detail information of Asa4G00711

Location

Gene	Chr	Start	End	Strand
Asa4G00711	chr4	202677268	202679886	-

Sequences

CDS

>Asa4G00711.1
ATGGCGGTTATCAATAATGCAAAATTGCTTATGTTCCTGTACCTTCTGTTCATATCCTTTGCACTAACGACATCAGACGATGCAGACGATGTGCGGACACTACATGCATTCAGGGACAGCATATTGGATCCACTAAGGTCTTTAAGCAGTTGGAACTCCAATATTGGCCCATGCATAAAACCGTTATGGATAGGCATCAAATGTCAAGCCGGTCAAGTGTTCGGGATCCAGTTAGAGGGCATGGGTCTTTCTGGTCGATTAGACTTGGATGTATTAATTCCTTTACCGCTTCTTCGCACACTAAGTTTCATGAACAATAATTTCTCTGGGCCATTACCTGATCTGAAGAATTTTCAAGGCCTTAAAAATGTGTTCTTTGCAATGAACCAGTTTGAAGGGGAGATTCCGGACGATGCTTTTGATGGTATGCAATCGTTGAAGAAGGTCAACTTATCAATGATTGGGTTTACTGGTAGGATACCGAGTTCACTTACACGGGTTAATTCACTTTCGGGTCTGTGGCTCAATGACAATGGGTTTGTTGGTGAGATTCCAGATTTTGAACAGACAGGCTTAGTAGCATTCAATGTTTCAAATAATCACCTGGAAGGAAGGATACCAGACAAGCTTAGTAAACTGGATCCTAGTAATTTTTCTGGCAACAAGGACCTTTGTGGCCAACCCACCAAATTACAGTGTGAAGACACAGCAGATCCTGATCTTCCACCATCACAGCACAAAAATCTCTCTACATCTAAAATCGCTGCAATTGCAGCTGCCACTGGACTAGTATTATTCATATTCGTCGCTGTACTGATACTACTACGAAATAAGAAAAACAGTGGAAAGAACAAGAAAATTCCCAGAGCAACATCAGTTCCCCACAATCCTACTACGGTAGAGACTGACCAGAACCTAGATAGGAAAGGTAAGAAACCAATGGCAGTAGCCAACGAAAGAGATCATGGAAAGCTTGTGTTCTTGAATGAAGAAAGGACGGAAATATTTGAACTGCAAGATCTACTAAAGGCCTCAGCTGAAGTACTGGGAGGGGCAGAGTTGGGATCATCGTACAAGGCGTTATTAATCAATGGCCCTGCGGTTGTAGTTAAAAGGTACAAAGAGATGGACAGAGTTGGAAGGGAAGATTTCCATGAATATATGAAGACAATTGGTAGGTTGTCGCATCCCAACTTGCTTCCTATACTTGCTTATCATTCTAGAAAGGACGAGAAGCTCTTGGTTACGGAGTTCGTCCCTTACGGGAGCTTAGCCAATATGCTTCATGGAAACCGGACTGTGGATAACCCAGCTCTAGATTGGGGCACACGTCTGAAAATCGTCAAAGGAATAACAAAAGGCTTATCGTACTTATACGAAGAACTTTCGACAGAAAATGCACCACATGGACATTTGAAATCCTCAAATGTGCTACTATCCGACAGTTACGAGCCACTTTTAACAGACTACGGTTTGATACCTCTAATCAGCCAGTCCCACGCTTCTCAAAAAATGATCGCATTCAAATCTCCCGAGTGCAAGCAAAATGGACGTGTGTCTAAAAAAAGCGACGTGTGGAGCCTGGGAGTGCTTATATTGGAATTATTGACGGGGAAATATCCAGGCAACTACACTAGGAACGCACGAGGGGGATCGGATTTATCAAACTGGGTGAACTCGGTAGTCAGGGAGGAGTGGACAGGCGAGGTGTTTGATGGAGAAATGAAGAGGACGAGGAGCAGTGAAGGTGAAATGTTGAGTTTGCTGCAAATAGGAATGGGGTGCTGCGAAATGGATGTGAATAAGAGATGGGATATGAGGGATGCTGCGGAGAAGATCGCGGAGTTGAAAGAGACCGACGTTGAGGATGAGTACTCTTCCTTGGCCAGTGAAGGAGATGGTTATTCCTCCAGGGGTGGGGTTACCGAAGATGACTTCTCCTTTTCCACTAATAACCCTTGA

Protein

Gene

>Asa4G00711.1
ATGGCGGTTATCAATAATGCAAAATTGCTTatgttcctgtaccttctgttcatATCCTTTGCACTAACGACATCAGACGATGCAGACGATGTGCGGACACTACATGCATTCAGGGACAGCATATTGGATCCACTAAGGTCTTTAAGCAGTTGGAACTCCAATATTGGCCCATGCATAAAACCGTTATGGATAGGCATCAAATGTCAAGCCGGTCAAGTGTTCGGGATCCAGTTAGAGGGCATGGGTCTTTCTGGTCGATTAGACTTGGATGTATTAATTCCTTTACCGCTTCTTCGCACACTAAGTTTCATGAACAATAATTTCTCTGGGCCATTACCTGATCTGAAGAATTTTCAAGGCCTTAAAAATGTGTTCTTTGCAATGAACCAGTTTGAAGGGGAGATTCCGGACGATGCTTTTGATGGTATGCAATCGTTGAAGAAGGTCAACTTATCAATGATTGGGTTTACTGGTAGGATACCGAGTTCACTTACACGGGTTAATTCACTTTCGGGTCTGTGGCTCAATGACAATGGGTTTGTTGGTGAGATTCCAGATTTTGAACAGACAGGCTTAGTAGCATTCAATGTTTCAAATAATCACCTGGAAGGAAGGATACCAGACAAGCTTAGTAAACTGGATCCTAGTAATTTTTCTGGTAAGGTcaacaaacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaaaaaagaaaaagaaaacttaaaATATATAGGTTAACATTGAGCTGTagttattttcttgatttttatattacaggcAACAAGGACCTTTGTGGCCAACCCACCAAATTACAGTGTGAAGACACAGCAGATCCTGATCTTCCACCATCACAGCACAAAAATCTCTCTACATCTAAAATCGCTGCAATTGCAGCTGCCACTGGACTAGTATTATTCATATTCGTCGCTGTACTGATACTACTACGAAATAAGAAAAACAGTGGAAAGAACAAGAAAATTCCCAGAGCAACATCAGTTCCCCACAATCCTACTACGGTAGAGACTGACCAGAACCTAGATAGGAAAGGTAAGAAACCAATGGCAGTAGCCAACGAAAGAGATCATGGAAAGCTTGTGTTCTTGAATGAAGAAAGGACGGAAATATTTGAACTGCAAGATCTACTAAAGGCCTCAGCTGAAGTACTGGGAGGGGCAGAGTTGGGATCATCGTACAAGGCGTTATTAATCAATGGCCCTGCGGTTGTAGTTAAAAGGTACAAAGAGATGGACAGAGTTGGAAGGGAAGATTTCCATGAATATATGAAGACAATTGGTAGGTTGTCGCATCCCAACTTGCTTCCTATACTTGCTTATCATTCTAGAAAGGACGAGAAGCTCTTGGTTACGGAGTTCGTCCCTTACGGGAGCTTAGCCAATATGCTTCATGGTTAGTCTTTCATCCTTTGTTAAATGTTTTTTTAATACCCTTGTGAGCTATATACTGTTGCAGTTCGCTAGGATTTGGAGGTTGGATGTAGATTATCCTCAGGGCATATTTATATGTTTTAGTCTATATGGTCATAAAATTGAATTTGCATGAAgtttctaaaattgtagaaaacATGGAAGAACTTATCAGAGATGTTAAATCTCAATAAATCTTCTAATACTCATAGATGACTAATCTCTAGTCCAAACTCACCATTTAGTGTTCCTCTAATGCTTATTACAACCTATTCTTGTGCTACATGTATCTCATTGATTAAATATGGATAACATCATATCTTACATATAGATTCCTGATTTTCAACCTCAATATAATTTGACTTGAAACCTCaatataatttgattaaatatgCTTAGTACAACATGTCCATTTAATTTGAAACCTCAATATAATGACCAGATGAGTTAATCTTTGAGTATACATGGACCTAGCTactttcaacatatcatatttaatcTTTTCATATTCAGGAAACCGGACTGTGGATAACCCAGCTCTAGATTGGGGCACACGTCTGAAAATCGTCAAAGGAATAACAAAAGGCTTATCGTACTTATACGAAGAACTTTCGACAGAAAATGCACCACATGGACATTTGAAATCCTCAAATGTGCTACTATCCGACAGTTACGAGCCACTTTTAACAGACTACGGTTTGATACCTCTAATCAGCCAGTCCCACGCTTCTCAAAAAATGATCGCATTCAAATCTCCCGAGTGCAAGCAAAATGGACGTGTGTCTAAAAAAAGCGACGTGTGGAGCCTGGGAGTGCTTATATTGGAATTATTGACGGGGAAATATCCAGGCAACTACACTAGGAACGCACGAGGGGGATCGGATTTATCAAACTGGGTGAACTCGGTAGTCAGGGAGGAGTGGACAGGCGAGGTGTTTGATGGAGAAATGAAGAGGACGAGGAGCAGTGAAGGTGAAATGTTGAGTTTGCTGCAAATAGGAATGGGGTGCTGCGAAATGGATGTGAATAAGAGATGGGATATGAGGGATGCTGCGGAGAAGATCGCGGAGTTGAAAGAGACCGACGTTGAGGATGAGTACTCTTCCTTGGCCAGTGAAGGAGATGGTTATTCCTCCAGGGGTGGGGTTACCGAAGATGACTTCTCCTTTTCCACTAATAACCCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010913795.1	4.6e-162	pollen receptor-like kinase 1
Swissprot	Q9LJY0.1	1.7e-137	Pollen receptor-like kinase 4
trEMBL	A0A6I9QV51	3.3e-162	pollen receptor-like kinase 1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G35390.1	46.84	1e-154	543	PRK1	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G00711	AT5G35390.1	664	312	15	4	643	11	657	46.84	1e-154	543
Asa4G00711	AT3G20190.1	635	326	9	28	651	50	678	45.98	1e-146	517
Asa4G00711	AT2G07040.1	647	348	8	7	643	3	642	43.59	1e-145	514

Ortholog group

Species	Genes
Allium cepa	g269277.t1; g273941.t1; g321814.t1
Allium fistulosum	AfisC4G00829; AfisC4G04922; AfisC6G05589
Allium sativum	Asa4G00711.1; Asa5G04205.1; Asa8G01662.1
Arabidopsis thaliana	AT1G50610.1; AT2G07040.1; AT3G20190.1; AT4G31250.1; AT5G35390.1
Oryza sativa	LOC_Os02g07810.1; LOC_Os06g45240.1; LOC_Os08g40990.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	28	68	29.9	4.6e-07
PF07714.14	Pkinase_Tyr	Domain	348	610	95.9	2.1e-27

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network