result

Gene information

Detail information of Asa4G00795

Location

Gene	Chr	Start	End	Strand
Asa4G00795	chr4	228180395	228182983	-

Sequences

CDS

>Asa4G00795.1
TGTTAATGACCGAAGCAGAAACAAGGCCAGATGTGATGATCGGCAACAACGACAAACCAAAATGGTTACCAAAAGTGGATATATTATTTGACAATGAAAATGATGCATATGAATTTTACAACTCATATGCCGAAAATATAGGTTTCTTTGTTAGAAGGTCAACGTTATGGACGTCGTCAAAAAATATTGTAACCCGAAGGACATTTGTATGTTCAAGAGAAGGATTTCGAGAGAAAAAGAAGGGAGCAAAAGAGGTCAAATCTCCAAGACCTGAAACTAGAATCGGCTGCCCAGCTTGCATGACTATAAGGCTTACTCCTAATGGAAAATACAAAGTTACAGAATTTGAACCAAATCATAATCATCCACTTGCAACTACATCAACAATTAATATGTTGAAGGCTAAGAAAATGAGGCGGAAGGCTCGAGCTGTTAGAGCTGATTTAGTCGATGACTCGGTGAGGACTCCTGAGTTTGAAACCGAAGAGGAAGCTTATGAGTTTTATTGTATGTATGCAGCAAAAATAGGGTTTATTGTGAGGAGGGCTAGCATGACTATGAGCGCTGATAATGTAATCACTAGACGCATGTTTGTTTGTTCAAAAGAAGGTTTTCGAGAAAGTAAGAAGGGATCGAAACGGGTTAAAAAACCACGACCTGAAACTAGAACGGGTTGCCCAGCTTGTATGATCATTAGATTGACTCCAGCTGGAAAGTATCATGTGTCTGAGTTCGTTACCAGACATAATCATCAACTAACAATTCCTTCATCACTTGACCTAGTAGTCCACAGTTTGGATAATGAAATGAATCAAGTGGATGGATCGGTAGCTAGCATTAAGGAAAAAGAACAAACTGACAAGGGCATGGAATTGCCTATTCGAGGGTCCAAATATGCAAAATCTATGCATACTGGAGATTTAGGGGCAGTATTGCAGTATTTACAAAAAATGCAGAATGAAAACCCCTCTTTCTTTTATGCAGTACAAGCTGATGAATATGATAATATGGTTAACTTTTTTTGGACAGATTCGAAGTCTGTTCTAGACTATACGTATTTTGGTGATTCAGTTTGTTTCGATACAACTCATAATATACACGGCTATGATAGACCTTTTGTTCAATTCACAGGGGTTAATCATCATAAACAGCCCATATTATTTGGTTCAGGGTTGATGTACGATGAAAGCATTGCATCATTTAAATGGTTGTTCGATAATTTTAAAGTAGCTATGAGCGGCAAACAACCTAAAACAATATTGACAGACTGGTCCGATGCAATTGGTGAAGCTGCAGTTTTGGCTTTTCCAGATTCAAACCACAGATATTGTGTTTGGCACATATACCAAAGAACAATTGAGCAATTAAGTCAGGCTTTTCATGGTTCGAAAACATTATCTTATGATTTCAGTAAATGCATATTTGATTGTGAAGACGAGGAAGAATTTACTTTGGCATGGCATGGTATATTAGAAAAGTATGATCTCAAAGATAACCAGTGGTTAAGAAATATATTCGAGCGAAAGGAGAAGTGGTCTTTAGCATATGGAAGAGAAGCATTTTATGCAGACTTAAAAAGTGTTCAACAGAAAGATAGTTTAAGCATAGAGTTAAAAAGGCATTTAAGCCTGGAAAATGATATATTGAGTTTTTTTGTGCATTTTGAAAGAGTAATCGAAGAAAGGCGACTTGCTGAACTACAATCTGATGTCCAGGCAAGTCAAAATGCTAGAAAATTACCATCCATACGTATATTAAAACAAGCAGCAAGCGTTCTTACACCATCTGCATATAGAATGTTTGAGAGGGAATTCGAGTTTTACATGGATTGCATGCTATATAATTGCGGTGAAGTCGATACTCTATCCAAATACAAAATTACACTTGATGAGAGAACAAAAGATCATTTTGTTACGTTCAATTCCTTGGACTTATCCGCAACATGCACGTGCAAATTGTTTGAGTTCGTAGGAATTCAATGTCGACATGTGCTGAAAGTTCTTGATGCTAGAAATATCAAAGATCTCCCATCACATTACATTATGAAGCGATGGAGAAAAGATGCAAAAGATGGAACTTTTAGTAGCCATTGCAATTTGCACATCGAAGATGATTCCAAATTATCAATAGAAAAACGTAGAAGCTTTCTACATAGCATGTTCAGTGTTATTGCTTCTAGGGGTGCAAAAGCTGTAGATTCTTATATGATCATCGAGAGTCAGTCTGAGCTGCTGTTAGATCAAATCGCACGGTCAAGAGCTCTCGAGCTTCCTCCTTTAACAGACACATCATCTGATCAGGCACATAGCAAAATCGATGCTGCTGCACTTGATGGAAGTTTCCTCTTTGATAAAGTCAATCAAGCAAGCTTCATGAATCATTCATCTAACGGTTTTCTAAGCTCGAGGATTTCACATCCAACAGTATGTTGGGGGCAGTTTCCAGCTGGGCCACCAGAGCAGTGA

Protein

Gene

>Asa4G00795.1
TGTTAATGACCGAAGCAGAAACAAGGCCAGATGTGATGATCGGCAACAACGACAAACCAAAATGGTTACCAAAAGTGGATATATTATTTGACAATGAAAATGATGCATATGAATTTTACAACTCATATGCCGAAAATATAGGTTTCTTTGTTAGAAGGTCAACGTTATGGACGTCGTCAAAAAATATTGTAACCCGAAGGACATTTGTATGTTCAAGAGAAGGATTTCGAGAGAAAAAGAAGGGAGCAAAAGAGGTCAAATCTCCAAGACCTGAAACTAGAATCGGCTGCCCAGCTTGCATGACTATAAGGCTTACTCCTAATGGAAAATACAAAGTTACAGAATTTGAACCAAATCATAATCATCCACTTGCAACTACATCAACAATTAATATGTTGAAGGCTAAGAAAATGAGGCGGAAGGCTCGAGCTGTTAGAGCTGATTTAGTCGATGACTCGGTGAGGACTCCTGAGTTTGAAACCGAAGAGGAAGCTTATGAGTTTTATTGTATGTATGCAGCAAAAATAGGGTTTATTGTGAGGAGGGCTAGCATGACTATGAGCGCTGATAATGTAATCACTAGACGCATGTTTGTTTGTTCAAAAGAAGGTTTTCGAGAAAGTAAGAAGGGATCGAAACGGGTTAAAAAACCACGACCTGAAACTAGAACGGGTTGCCCAGCTTGTATGATCATTAGATTGACTCCAGCTGGAAAGTATCATGTGTCTGAGTTCGTTACCAGACATAATCATCAACTAACAATTCCTTCATCACTTGACCTAGTAGTCCACAGTTTGGATAATGAAATGAATCAAGTGGATGGATCGGTAGCTAGCATTAAGGAAAAAGAACAAACTGACAAGGGCATGGAATTGCCTATTCGAGGGTCCAAATATGCAAAATCTATGCATACTGGAGATTTAGGGGCAGTATTGCAGTATTTACAAAAAATGCAGAATGAAAACCCCTCTTTCTTTTATGCAGTACAAGCTGATGAATATGATAATATGGTTAACTTTTTTTGGACAGATTCGAAGTCTGTTCTAGACTATACGTATTTTGGTGATTCAGTTTGTTTCGATACAACTCATAATATACACGGCTATGATAGACCTTTTGTTCAATTCACAGGGGTTAATCATCATAAACAGCCCATATTATTTGGTTCAGGGTTGATGTACGATGAAAGCATTGCATCATTTAAATGGTTGTTCGATAATTTTAAAGTAGCTATGAGCGGCAAACAACCTAAAACAATATTGACAGACTGGTCCGATGCAATTGGTGAAGCTGCAGTTTTGGCTTTTCCAGATTCAAACCACAGATATTGTGTTTGGCACATATACCAAAGAACAATTGAGCAATTAAGTCAGGCTTTTCATGGTTCGAAAACATTATCTTATGATTTCAGTAAATGCATATTTGATTGTGAAGACGAGGAAGAATTTACTTTGGCATGGCATGGTATATTAGAAAAGTATGATCTCAAAGATAACCAGTGGTTAAGAAATATATTCGAGCGAAAGGAGAAGTGGTCTTTAGCATATGGAAGAGAAGCATTTTATGCAGACTTAAAAAGTGTTCAACAGAAAGATAGTTTAAGCATAGAGTTAAAAAGGCATTTAAGCCTGGAAAATGATATATTGAGTTTTTTTGTGCATTTTGAAAGAGTAATCGAAGAAAGGCGACTTGCTGAACTACAATCTGATGTCCAGGCAAGTCAAAATGCTAGAAAATTACCATCCATACGTATATTAAAACAAGCAGCAAGCGTTCTTACACCATCTGCATATAGAATGTTTGAGAGGGAATTCGAGTTTTACATGGATTGCATGCTATATAATTGCGGTGAAGTCGATACTCTATCCAAATACAAAATTACACTTGATGAGAGAACAAAAGATCATTTTGTTACGTTCAATTCCTTGGACTTATCCGCAACATGCACGTGCAAATTGTTTGAGTTCGTAGGAATTCAATGTCGACATGTGCTGAAAGTTCTTGATGCTAGAAATATCAAAGATCTCCCATCACATTACATTATGAAGCGATGGAGAAAAGATGCAAAAGATGGAACTTTTAGTAGCCATTGCAATTTGCACATCGAAgatgattccaaattatcaatagAAAAACGTAGAAGCTTTCTACATAGCATGTTCAGTGTTATTGCTTCTAGGGGTGCAAAAGCTGTAGATTCTTATATGATCATCGAGAGTCAGTCTGAGCTGCTGTTAGATCAAATCGCACGGTCAAGAGCTCTCGAGCTTCCTCCTTTAACAGACACATCATCTGATCAGGCACATAGCAAAATCGATGCTGCTGCACTTGATGGAAGTTTCCTCTTTGATAAAGTCAATCAAGCAAGCTTCATGAATCATTCATCTAACGGTATGTGATTCTTCTATCGATCATCTACAACTCCAACTGTGAAATGTAACATCGATTTTTGTTTTTGTAAGTTGGgaactctttttatttaaaatagtaataattcagcATGTCATACTTTTAGGTTTTCTAAGCTCGAGGATTTCACATCCAACAGTATGTTGGGGGCAGTTTCCAGCTGGGCCACCAGAGCAGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020274753.1	0.0e+00	protein FAR1-RELATED SEQUENCE 5-like
Swissprot	Q9SZL8.1	1.0e-99	Protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A6I9QJM9	0.0e+00	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	36.52	6e-102	369	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G00795	AT4G38180.1	575	327	11	157	700	78	645	36.52	6e-102	369
Asa4G00795	AT4G38180.1	118	70	2	23	136	73	190	37.29	2e-15	82.0
Asa4G00795	AT3G06250.1	749	419	19	5	691	3	706	29.77	9e-89	325

Ortholog group

Species	Genes
Allium cepa	g444353.t1; g47493.t1
Allium fistulosum	AfisC4G01089
Allium sativum	Asa4G00795.1
Arabidopsis thaliana
Oryza sativa	LOC_Os07g37630.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	37	124	86.0	2e-24
PF03101.12	FAR1	Domain	166	253	81.3	5.6e-23
PF10551.6	MULE	Domain	357	449	89.6	1.3e-25
PF04434.14	SWIM	Domain	624	671	29.5	3.7e-07

Gene Ontology

Accession	Ontology	Name
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network