result

Gene information

Detail information of Asa4G00840

Location

Gene	Chr	Start	End	Strand
Asa4G00840	chr4	243159507	243161836	-

Sequences

CDS

Protein

Gene

>Asa4G00840.1
ATGGAATCGCTCTGCAAAAGTGTATTAATTTCTACAGTTGTCACACTTTTTCAACTGTTAGCTGTTGTAGTTTTAACTTCAGCAGCATCAACAGTACCAACCAAATGTCCAGAAAAATGCGGCAACGTGAGCATCTCATATCCATTTGGCATAAACGATGGATGTTTCCGCGAAGGTTTCAAAATCATATGCAATGAAACATTGGGCACAGCAAGCACAATTGACGGTAATGAAATCATCGATATATCCATTTCTCAAGCTCAAATGCGCATCTACAACTACGTCGGCTATTCTTGCAACTATACAAAGAGAGAACACGACGTAAGCCTCGATAGTTATCTAAGCTTAAGTGACCGATACAGACTTTCAAACACACACAACAAATTTACTACAGTGGGATGCCAGACTTTTGCAATTTTATACGGTGTTTATTCTGGGAGCATTCACACACCTAAATCTTATATCTCTACTGCTGGATGTATATCTTTATGTACCAACCAATGTAGATTTGTGGACGGTTCACCGTGTTTGGGAATAGGATGTTGCCAAACAACTTTACCAGAAGGACTCTCGTATTACATAATAAGTTTCAAACCTGATTTTCTAGAAAAAGCTAAAATGAACTACAGTCCTTGCAGTTATGCATTTGTTGCAGAAGAAGGGTTCTACAGCTTTCTTCAATCCGACACTAAACATGGCAATTTGTATTATAACCGATTTCAGCAGGCTCCTCTGGTGCTAGATTGGGTTTTAGGAAACGAAACCTGTAAAGAAGCAAGACTGAACAAGTCAGGGGACTATGCATGTGTTAGTTTGAAAAGCACTTGTAAGGACTCTCAGAATGGGCCGGGCTATACATGCAGTTGTAGTCCAGGCTATCAAGGCAATCCTTACATCCATGGTGATGGTGGATGCACAGGTATACTAATTAAATCATTTCTTTGCAATTTTTACGTTGGATCAAAATGAAATGTTTGTGTTTATTGTTGCCGCCAGATACCGATGAATGCAAAAACATCACACTAAGTCAATGTTATGGAAACTGTACTAATCTACAAGGCAGTTATTCTTGTACATGCCCAGTTGGATCTAAATGCATCCCGAAAACAAAAGATGGTTGCATACAGAAGAATTCAAAATTTCCAACATTTGTCATCATAAtcatagttaaataaataaattgtctcGCTTCATTTAAGTTATATGTTGCACTTAAAATCCCAAAGCTATATTATCCTCTCTCTTTCGTTCTGTATTTAGTAATGTAGTCTTGGAGATATATAGAAAGAAATAATCAAATAACATGACACTAATTTTACCTTGAATTATACAATCATTATGTTACGCTGACAGGAAAACTATTCATCATGTCTTTATCAACTGTAGTGGCGTAATTTGTGGATAGTCATATGATATACCATATACTGAAGTTGTAATACATTTATGCAGTTGGTTTCAGTGCTTTTCTCCTCAGCGTTGTTCTGTACGCAATATTTGGAAAAGTAAAGCAAATTAGAGCAAAAAAGAAATGCTTTAGTCAAAACGGAGGCTTGCTTCTACAATTTCAGATGAACGTACATTAATCGGTGCGATTCAAGATATACTCAATAGAAGAAATCAAAAAAGCAACAGACAACTTcaatgaaaattccattgtaggCCAGGGTGGCCAGGGCGTAGTCTTTCGAGGAATCACATATAAAAACACGAAAGTTGCAATTAAAAGGTTTATCCTAACAGATGCAGAGAGAAAAAAGGTTTTTGCAAAGGAAATGTGTATGCTATCTCTCATAAACCACAAAAACGTGATTCGAATTTTAGGCTGCTGTTTAGAAGTAAAAGTTCATATCTTAGTTTATGAGTACATACCGAAAGGTACATTGTACCAACGCATCCAGTCTAAGGATCAACCTATGTCGTTGACTTTTCGGCTTAAAATTGCCATTGAGACTGCATCAGCACTAGCTTATCTACATAATGATTCTCACCCTTCGATAATTCATGGGGACGTTAAATCTTCAAACATATTACTTGATGAAAACGATGTGGCTAAAGTATCTGATTTTGGAGCTTCCAAGTACCCTCTTACTCTTAAAGAAGTAAATGATTCGGATGTACCCGGCACCCTCCGGTACGTCGACCCAGAGAGCTTGAATACGCGTCGACTTACTACAAAGAGTGATGTATTCAGTTTTGGAGTGGTAGTTCTTGAACTATTCACAAGGATGACGGCAGTGCATTTTGAGGAATCCGGAGAAAAAAAGGCCTTATGGTCGAGACACGAAGAGGAGGGGTTGGAAAAACTTCTAGATGATGAAATCAAGCACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	THU64093.1	5.4e-105	hypothetical protein C4D60_Mb01t22820
Swissprot	Q9LMN6.1	1.3e-66	Wall-associated receptor kinase 4
trEMBL	A0A4S8JP47	3.9e-105	Wall-associated receptor kinase 2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21240.1	48.46	3e-51	199	WAK3	wall associated kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G00840	AT1G21240.1	227	111	2	307	527	422	648	48.46	3e-51	199
Asa4G00840	AT1G21240.1	303	168	15	13	298	9	286	30.69	2e-25	114
Asa4G00840	AT1G21250.1	223	113	1	307	527	416	638	48.43	5e-49	192

Ortholog group

Species	Genes
Allium cepa	g178580.t1; g220669.t1; g89047.t1; g89061.t1; g89069.t1; g89081.t1; g91805.t1
Allium fistulosum	AfisC1G08189; AfisC1G08192; AfisC1G08200; AfisC1G08207; AfisC1G08218; AfisC1G08220; AfisC1G08518; AfisC1G08519; AfisC2G04509; AfisC3G02334; AfisC3G06813; AfisS72G00002
Allium sativum	Asa0G01845.1; Asa0G02849.1; Asa0G04439.1; Asa1G01131.1; Asa4G00840.1; Asa7G06588.1; Asa7G06608.1; Asa7G06609.1; Asa7G06610.1; Asa7G06611.1; Asa7G06618.1; Asa7G06623.1; Asa7G06629.1; Asa7G06631.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g30110.1; LOC_Os04g30340.1; LOC_Os04g55750.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	34	136	88.7	3.7e-25
PF08488.8	WAK	Family	176	290	24.8	2.2e-05
PF07714.14	Pkinase_Tyr	Domain	307	496	140.1	6.9e-41

Gene Ontology

Accession	Ontology	Name
GO:0016021	C	integral component of membrane
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0030247	F	polysaccharide binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network