result

Gene information

Detail information of Asa4G01055

Location

Gene	Chr	Start	End	Strand
Asa4G01055	chr4	296260224	296262313	-

Sequences

CDS

>Asa4G01055.1
ATGGCCGCCGTACTCATCGTTTCCATCCTCACCTTCTCCCTCTTCCCTCCAGCCCACCCCTTACCCCTTGTCAACAACACCGAAGTCGGCCCTCTCCTCCTCCTCAAATCTGGATTCTCCGACCCCACATCTCTCTCCTCCTGGAACCAAACCACCACCCCGTCTCCATGCGACGCCGCATCGCCCTGGCTCGGCGTCATTTGCGACGGCGACGCCGTTATCGGCCTCAACCTTGAAAACCTTTCGCTCTCCGGCTACATCGACGTTCACGCCCTCTCCAAGCTCAAATCCCTTCGCGCTCTTTCCCTAGTCCAAAATCGCTTCCACGGCCCCGTCCCTCTCTTCAGCAAGCTCGACAAACTCAAAGCCCTCTACCTGTCCCACAATCTCTTCTCCGGCGCGATACCTGACGACTTCTTCGACGGCATGATCCACCTGAAAAAGCTTAGTCTGAACAATAATCAGTTCACCGGCAGCATCCCTTCCTCCTTGTCCAAATGCATGTTGCTCAAGGAGCTGCGAATGATGAACAATCAGTTTTCCGGTCAGATCCCTAATTTAGAACTTCCTAGTCTCAGGCTGCTCAACGTTTCCAACAATCAGTTAAGTGGCCCAATACCTGAACCCTTAGCAAAAAAATTCAAACAAGATTCGTTCTCAAATAACCCCGGTCTATGTGGGCCTCCATTAACTGAAAACCCTTGCCCACCTCCTGCTCTACCCGCCCCGCTCGCCCCACCGCCACCTGTCCATAAAGACCACACTGCCTTAATGGGTGGGGCATTCATGGCTGCTACATTGACAATCTTATTAATTCTGATACTTAGAAGCAAGAAGGAGGAGAAGTTTGACACACTGGGGACGAGCACCAGAGAGGTGAAATCGGAGAAAGGGTCCTCGAGGGGGTCAGTGAAATCATCCAGCAGCAAAGCAGGGTCCTCAAAGGCCGGAAAGAAAGGGGACAAAGCTGCAGGTGTTGGTACTATGGAAGGCGACCTTATGATGGTGAACGAGGCAAAGGGTGTTTTCGGTATGTCGGATTTGATGAAGGCTGCCGCTGAGATTATGGGCAGCGGAGGGATGGGTTCTGCTTACAAAGCCGTTATGGAGAACGGAACAGTGTTGGCTGTGAAAAGGGTCAGAGAGATGAACAGGGTTGGAAAAGAGACATTTGATGTTGAATTGAGAAGGTTGGGTAGATTGAAACACGACAACGTATTACCTCCTTTGGCTTATCTTCATAAAAAGGAGGAGAAGTTGATCATTTCCGAGTTTGTTCCTAAGGGCAGCTTACTCTACATTCTTCACGGCGATAGAGGAACAGATCATGCAGCATTGAACTGGCCGACAAGGCTAAAGATACTGGTCGGCATTGCACATGGGATGTGCTACCTTCAGTCAGAGCTCAACCATTTGGACATACCTCATGGCAATTTGAAATCAAGCAATGTACTATTAACTCCTGATTTCGAACCACTCTTAGTGGATTATGGGTTCATTTCTCTTATGAATCCATCTGTAGCTACTCATTCCATGTTTGCGTACAGATCGCCTGAATCTCTGACACAACGTCGGTTATGTCCTAAGGCTGATGTATATTGTTTTGGAATCATCATTCTAGAAGTTCTCATTGGGAAGTTTCCTTCACAATATCTGAATAACAGCAAAGGGGGAACGGATGTGGTACAGTGGGTACATTCAGCAGTTGCAGAAGATATAGTAGCTGAGCTTATAGACCCTGCTATTATAGTAGATGCGAAACCGGCTGTACCAGAGATGGAGAAGGCTATCCATGTTGGGGTTGCTTGTGTGGAGTCGAACCCCGATGCAAGGATAGATATGAAGGAAGCGTGTAGAAGATTGGAAGAGATAGCGGCAAACGTTAATATGTCTACAGTGGTTACTTTGTCTAGGCGGGGGAGTTACGCGGAGTTGTTACGCGAAGGATCAGGAAGAAGAGCGACTAGTATTACGGATAGGTCGAGGAGTATGAAAGGTCATGACTCCTCTTTTGCTATGTCCTGA

Protein

Gene

>Asa4G01055.1
ATGGCCGCCGTACTCATCGTTTCCATCCTCACCTTCTCCCTCTTCCCTCCAGCCCACCCCTTACCCCTTGTCAACAACACCGAAGTCGGCCctctcctcctcctcaaatctGGATTCTCCGACCCCACATCTCTCTCCTCCTGGAACCAAACCACCACCCCGTCTCCATGCGACGCCGCATCGCCCTGGCTCGGCGTCATTTGCGACGGCGACGCCGTTATCGGCCTCAACCTTGAAAACCTTTCGCTCTCCGGCTACATCGACGTTCACGCCCTCTCCAAGCTCAAATCCCTTCGCGCTCTTTCCCTAGTCCAAAATCGCTTCCACGGCCCCGTCCCTCTCTTCAGCAAGCTCGACAAACTCAAAGCCCTCTACCTGTCCCACAATCTCTTCTCCGGCGCGATACCTGACGACTTCTTCGACGGCATGATCCACCTGAAAAAGCTTAGTCTGAACAATAATCAGTTCACCGGCAGCATCCCTTCCTCCTTGTCCAAATGCATGTTGCTCAAGGAGCTGCGAATGATGAACAATCAGTTTTCCGGTCAGATCCCTAATTTAGAACTTCCTAGTCTCAGGCTGCTCAACGTTTCCAACAATCAGTTAAGTGGCCCAATACCTGAACCCTtagcaaaaaaattcaaacaagatTCGTTCTCAAATAACCCCGGTCTATGTGGGCCTCCATTAACTGAAAACCCTTGCCCACCTCCTGCTCTACCCGCCCCGCTCGCCCCACCGCCACCTGTCCATAAAGACCACACTGCCTTAATGGGTGGGGCATTCATGGCTGCTACATTGACAATCTTATTAATTCTGATACTTAGAAGCAAGAAGGAGGAGAAGTTTGACACACTGGGGACGAGCACCAGAGAGGTGAAATCGGAGAAAGGGTCCTCGAGGGGGTCAGTGAAATCATCCAGCAGCAAAGCAGGGTCCTCAAAGGCCGGAAAGAAAGGGGACAAAGCTGCAGGTGTTGGTACTATGGAAGGCGACCTTATGATGGTGAACGAGGCAAAGGGTGTTTTCGGTATGTCGGATTTGATGAAGGCTGCCGCTGAGATTATGGGCAGCGGAGGGATGGGTTCTGCTTACAAAGCCGTTATGGAGAACGGAACAGTGTTGGCTGTGAAAAGGGTCAGAGAGATGAACAGGGTTGGAAAAGAGACATTTGATGTTGAATTGAGAAGGTTGGGTAGATTGAAACACGACAACGTATTACCTCCTTTGGCTTATCTTCATAAAAAGGAGGAGAAGTTGATCATTTCCGAGTTTGTTCCTAAGGGCAGCTTACTCTACATTCTTCACGGTATGTCCATTAACTCCAGCACTTCTCATTCAAACGAATGATGATATAGCATGTCATTTGTACAGGCGATAGAGGAACAGATCATGCAGCATTGAACTGGCCGACAAGGCTAAAGATACTGGTCGGCATTGCACATGGGATGTGCTACCTTCAGTCAGAGCTCAACCATTTGGACATACCTCATGGCAATTTGAAATCAAGCAATGTACTATTAACTCCTGATTTCGAACCACTCTTAGTGGATTATGGGTTCATTTCTCTTATGAATCCATCTGTAGCTACTCATTCCATGTTTGCGTACAGATCGCCTGAATCTCTGACACAACGTCGGTTATGTCCTAAGGCTGATGTATATTGTTTTGGAATCATCATTCTAGAAGTTCTCATTGGGAAGTTTCCTTCACAATATCTGAATAACAGCAAAGGGGGAACGGATGTGGTACAGTGGGTACATTCAGCAGTTGCAGAAGATATAGTAGCTGAGCTTATAGACCCTGCTATTATAGTAGATGCGAAACCGGCTGTACCAGAGATGGAGAAGGCTATCCATGTTGGGGTTGCTTGTGTGGAGTCGAACCCCGATGCAAGGATAGATATGAAGGAAGCGTGTAGAAGATTGGAAGAGATAGCGGCAAACGTTAATATGTCTACAGTGGTTACTTTGTCTAGGCGGGGGAGTTACGCGGAGTTGTTACGCGAAGGATCAGGAAGAAGAGCGACTAGTATTACGGATAGGTCGAGGAGTATGAAAGGTCATGACTCCTCTTTTGCTATGTCCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008792889.3	1.8e-129	pollen receptor-like kinase 3
Swissprot	Q3E991.4	4.2e-99	Pollen receptor-like kinase 6
trEMBL	A0A835R084	6.0e-135	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G20690.1	42.68	4e-140	495	PRK6	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G01055	AT5G20690.1	635	321	12	27	624	29	657	42.68	4e-140	495
Asa4G01055	AT3G42880.1	648	335	15	1	625	1	632	42.28	6e-139	491
Asa4G01055	AT1G72460.1	630	344	12	27	635	23	644	40.79	9e-121	431

Ortholog group

Species	Genes
Allium cepa	g271928.t1
Allium fistulosum	AfisC4G01143
Allium sativum	Asa4G01055.1
Arabidopsis thaliana
Oryza sativa	LOC_Os06g09860.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	27	69	28.1	1.7e-06
PF13855.3	LRR_8	Repeat	120	180	33.4	2.6e-08
PF00069.22	Pkinase	Domain	354	619	92.3	2.8e-26

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network