result

Gene information

Detail information of Asa4G01097

Location

Gene	Chr	Start	End	Strand
Asa4G01097	chr4	305220738	305224202	+

Sequences

CDS

Protein

Gene

>Asa4G01097.1
ATGGGTCTGTGCTTCACTAAAACATATGAAATACCCATCACTTCTGGCTCCATGAAATCCACTACCCGACCACCATCAAGGTCATTTCCTTCTTTCCGTTCCTCAACCCCACAGTCAGAAAAAGGCTTCATCCTTGATAAACCAATGGTCGACATAACCTCTATTTTCATCATCGGCAAAGAACTAGGCCGAGGCCAATTCGGTATCACCTACGTATGTACCGAACGTGCAACTGGCTTAAGATATGCATGCAAATCTGTGTCGAAAAGAAAACTTGTAACTAAAACTGACGTAGATGATATAAGAAGAGAAGTGATGATCCTTCAGCATCTCACTGGTCAGCCAAATATTGTTGATTTCAAAGGAGCTTACGAGGATAGGCAAAACGTGCATTTGGTCATGGAGCTGTGCTCTGGAGGAGAGCTTTTCGATAGGATCATTGCAAAGGGGAGCTATTCGGAGAAAAAAGCTGCTTTTATATGTAGAAGCGTTGTGCGTGTCGTCCATGTTTGCCATTTCATGGGTGTCATGCATAGAGATCTTAAGCCTGAAAATTTTCTCCTTGTCAGTCGAGATGAGGATTCTCCTCTAAAGGCAACTGATTTTGGCCTCTCTGTGTTCATCGAAGAAGGTCGGTTAATTTATGAATAAAGAATGTCATGTGTATATCAAGCAGAAATGTAATATTTGAGTAATCAATGTGTGCAGGGAAAATATACCGTGAAATAGTAGGAAGTGCTTATTATGTAGCGCCTGAGGTGTTGCACAGGAGCTATGGGAAAGAAATCGATGTCTGGAGTGCAGGAGTTATCCTCTACATTCTTCTTTGTGGAGTGCCACCATTCTGGGCAGGTGTAGAAATGGATGATAGTTTCATGATAAtagatgttttatttgattttgacaaaaaaaaattgaaaaatgaatgcaGAAACCGAAAGAGGAATATTTAATGCTGTACTGCAAGGTGACTTTGATTTGGAAAACGATCCATGGCAATCAATATCTTCTAGTGCAAAGGACTTGATCAGAAAGATGTTGACTTGGGATCCTAAAAAAAGAATCACAGCCGCCCAAGCACTTGGTATAAGACATGATGAAAAACAATTCGTAAAAATTAATTATTGGGAAAGAGCCAGtgctaaaaaaaattatataaactacATTTATTTGCAGAGCATCCATGGCTTAGAGAAGACGGAGATGCATCTGATAAACCAATGGATAGTGCAGTTTTGAATAGAATGAAGCAATTCAGAGCAATGAATAAGCTTAAGCAACTTGCATTAAAGGTACTAGACAAGCATGCACACACCTAGATATCTATCAGAGAAATATACTTATACTGTGGAAGtatgaaaatttgtttttcctATAATTCTAGATTTTGATTCATATTTTGCATTCCTAACGCAGGTTACTGCAAATAACTAAGGATGTgcaactataaaaatattgtgcaCTTAACTATCAATTAAAAGGAGATATAAAGTACATACTTTAAATACATCATCtattaatcaaattaatattcATGATCATTTCCCTGTGTTTTTAATTAGGATTGAAACCAAAATTGACTAATTCAACAGGCTACATCTGAATATTACCTAAATTGTTTGTTTATCTGTCTTTTTTCTTTCCAAGTAAAAATTTAGTGATAATCATTTGAATTTGCTATGCCATATGAGCAAAAAAACATAGGACTACAAAGTATTATATTATCTCCATATCACAAAAACAACCGCacattctaaagtataaaaaccgATCATATAGAAACAGTAGTCTAAAGACCTAACCCAACCTCGGTTAAACCACGGTTAATCTTCAATTTGAAAACGCTgcgattttgaaaatgaaataatcttGCATGCGCATGAATCCGCGGTTTAACCTCGAAACCCTTTACAAACATTTAGGTCAACATTTCTGAACCTCCCGGTTCTTTGAATTTGGAAAACAAACATAgcttcaccttttttttttttggcacaaTCAATTTACAAAACAATTTCATAGCCAGTCAGTGAATTCTGGATTATCTTATCAGTTTTGTGGTGTGACATAATACTTCACTAATGTAAATCTTACGAGTTACCGTTGAACTAAACCTCGAAATAATTAGGAAATTTACAATTTTGCTCTAAAAAGTTGTTATATAGTTATTCTGGTTAATGTTTGttatgaaatatttaaaaataattgttttaaatttatataccaGTTGGTTAAATTTTAATACTATTCGAAttgattttacatttaaatcaaattaacgtAAATAGACTATCAACGCGGTTTCCATTGTCTGACGACCAGTTAAACATGGGGAATTTTTAACATTTCATCAACACCATTTGACCTATTGCTAGATTTTCCAAATTATGCATAGAACTAGTTAAAAATGATTATGTGCTAGAATAATAAATCAATTATATAATTCTCTTTCCATTTCAATGCAGTACGCAATATGAAGGTACACTGATTGTGTTTTTAATGCATATTGCATCAAACAACAAAGAGGTTGCAGTTTTAATTCACATTGCATTAAAGCGTCAATCTTTTTCGCCTTTTTAATAACCAGTCCTCTATGTTGTGCCAATAGACAAGATGAAAGATTTTGGGTTGCTGTTTCAATGGAACATGCAACATCAAGATGCATTGTAGCTTGTTCAGTCCACTTCTGCAATTAAACAAGCCAGTATTTGATTTGCTTTATAGAAATTTATCTTTTATGGTGATTTAGGTTATTGCAGAGAATCTATCTGAAGAAGACATAAAAGGTTTGAAGCAAATGTTTAAGAATATGGACACTGATGGCAGTGGCACAATCACCTATGAAGAACTGAAGCTTGGGTTATCTAGACTTGGATCCAAACTCTCTGAAGCCGAAGTGAAGCAGCTAATGGAAGCCGTAATATTTTAACTTATTGCAAAAGAAcaaaaattgataaataaataattacaaatttaCAACTGCAACATATATTTCTGATGATGTGTACTAGGCTGACGTGGATGGAAGTGGGGCAATAGACTACATTGAGTTCATCACCGCTACCATGCATCGCCACAAACTGGAAAATGATGAGAATCTGCAGAAGGCTTTTCAGTATTTCGATAAGGATGGCAATGGGTTAGCGTGTAAATttgaggaaagaaaggaaaaaaaaaaagggggtTATACATTGTCTATAATCATTATCCATTTTCTGTTCTAGGTACATTACAAGAGATGAACTGAAACAGGGCATGACTCAATATAACATGGGGGATGAAGATACAATAAATGAAGTTCTTGATGAGGTGGACACAGATAAAGTGAGCTGATTACATAATATTGTTGTTCATTCAAATTGTTCTTACAGATTCACATGTGGTTAATTACAATGGAATTGATAGGATGGAATAATTAACTACGAGGAGTTTGTGGCAATGATGAGGAAAGGAAGTCATCCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020574172.1	4.2e-192	calcium-dependent protein kinase 29
Swissprot	Q8RWL2.2	3.5e-175	Calcium-dependent protein kinase 29
trEMBL	A0A835RR88	4.2e-194	Calcium-dependent protein kinase 29

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G76040.2	68.63	0.0	742	CPK29	calcium-dependent protein kinase 29

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa4G01097	AT1G76040.2	526	135	4	1	497	28	552	68.63	742
Asa4G01097	AT1G50700.1	514	157	3	1	497	1	514	66.15	725
Asa4G01097	AT3G20410.1	454	124	0	44	497	79	532	72.69	719

Ortholog group

Species	Genes
Allium cepa	g130570.t1; g162225.t1; g231872.t1; g242186.t1; g345287.t1; g358706.t1; g6696.t1
Allium fistulosum	AfisC2G03992; AfisC3G00401; AfisC4G01199; AfisC4G02630; AfisC7G02744; AfisC7G03157; AfisC8G05974
Allium sativum	Asa1G00063.1; Asa2G00507.1; Asa3G02641.1; Asa4G01097.1; Asa4G02052.1; Asa4G04163.1
Arabidopsis thaliana	AT1G50700.1; AT1G61950.1; AT1G76040.2; AT3G20410.1; AT4G04720.1; AT4G21940.1; AT4G21940.2; AT4G23650.1; AT5G12180.1; AT5G19360.1
Oryza sativa	LOC_Os01g43410.1; LOC_Os01g59360.1; LOC_Os04g47300.1; LOC_Os05g41270.1; LOC_Os05g50810.1; LOC_Os05g50810.2; LOC_Os07g33110.1; LOC_Os07g33110.2; LOC_Os07g33110.3; LOC_Os07g33110.4; LOC_Os07g33110.5; LOC_Os11g04170.1; LOC_Os12g03970.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	58	314	246.1	3.5e-73
PF13499.3	EF-hand_7	Domain	362	422	43.3	3.3e-11
PF13499.3	EF-hand_7	Domain	432	494	47.5	1.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005509	F	calcium ion binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network