Detail information of Asa4G01108


Location
GeneChrStartEndStrand
Asa4G01108chr4307355324307372382-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020254963.11.9e-264squamosa promoter-binding-like protein 1
SwissprotQ9SMX9.25.0e-185Squamosa promoter-binding-like protein 1
trEMBLA0A5P1FKZ91.4e-264SBP-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47070.143.540.0 668SPL1squamosa promoter binding protein-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag25103.t1
Allium fistulosumAfisC4G01208
Allium sativumAsa4G01108.1
Arabidopsis thalianaAT2G47070.1; AT3G60030.1
Oryza sativaLOC_Os01g18850.1; LOC_Os01g18850.2; LOC_Os01g18850.3; LOC_Os01g18850.4; LOC_Os03g61760.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain10017396.28.6e-28

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13415BRI1; protein brassinosteroid insensitive 1EC:2.7.10.1 2.7.11.1 Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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