Detail information of Asa4G01260


Location
GeneChrStartEndStrand
Asa4G01260chr4344426866344458165-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020268254.10.0e+00LOW QUALITY PROTEIN: TATA-binding protein-associated factor BTAF1
SwissprotB5BT18.10.0e+00Protein ROOT GROWTH DEFECTIVE 3
trEMBLA0A6I9RJE10.0e+00TATA-binding protein-associated factor BTAF1 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54280.160.580.02356ATBTAF1;BTAF1;CHA16;CHR16;RGD3DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases

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Ortholog group
SpeciesGenes
Allium cepag169808.t1
Allium fistulosumAfisC4G01354
Allium sativumAsa4G01260.1
Arabidopsis thalianaAT3G54280.1; AT3G54280.2
Oryza sativaLOC_Os02g06592.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12054.5DUF3535Family7881245326.82.3e-97
PF00176.20SNF2_NFamily14801773203.33.9e-60
PF00271.28Helicase_CFamily1836193754.89.4e-15

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15192BTAF1, MOT1; TATA-binding protein-associated factorEC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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