result

Gene information

Detail information of Asa4G01392

Location

Gene	Chr	Start	End	Strand
Asa4G01392	chr4	375468693	375471420	-

Sequences

CDS

>Asa4G01392.1
ATGGGAGGATCTTCTGAAACTATAAGCAGTTGTATTGAAAAAAAGTCCATACTGAAAAAGACCAGTATTAAAAGCTTAACTTCGGAACAAACTGGATGCAGGGAGAACATGCGAATTTCAGATAAGGAAATGAATAGTCAGACTGACTTGTCAAAGATTGATAAAAAGAAATGGGCTATGGAGATTCTTGCTAGAAAAAACGCTTCATCAAATACGGGTAGCAATGCAGAGGAAGTAGAAGATAAATCTGCACTCAAGGGAAAATATCCTTTACTAGCACAGCTTCCTATGGAAATGCGGCCTGTACCAGAGCCTAGCCGGCACAATAAGGTTCCTCTTTCTGTTCGACAGGCACAACTGTATCGCATAACTGAACACTTCTTGAAGGCAACAAACCAAGCAGTCATTCGTAAAACTGCAGATACAGAACTAGCAATAGCCGATGCAGTTAACACAGAGAGAGGAATTTTTGAAAAATCAAGTAGCAAAGTAGTTTATGTTAATCTTTGTGCACAAATTTTACCTCAAAAATCTATCAAACCATCATCATATGAACCAGTGACATCTAGTCATTCAGCACCTACAGACGAAGTTAACAATCAAGTTGTAGAAGAAGCATTGAAACTAGCTGGTCTTTCATCCGATTCTCCTCCAGATAGCCCTTCCATACGTATGAAAATGTATCATAATGCAGAAAATAGTGGTAACGAGTATCAAATTCCTACCAATACAGATCCATGTAAAGATTTATCCATTTCTGTAGAAAAAGCATTGAAATTAGCTGGACTTTCATCTGATTCTCCTCCAAATAGTTCTTGTGCATCTATGGAACAGTATCCTAATGCAGAAGATACCACTAATGAATTTGGAATTCCTCCTGATAAGGATTCATGTAAAGATTTTTCTATTTTTGGGGAAGAGAATTGCGATGAACTCATAGGCACGCCAAAAGAATGTATTAAAGTTTCGGAACCAGGAGCTGCTTCATCAACTCCTGAATGTGACACAATACTAACATGTAAAGAGGAAGTCCATTCTGAAGGGAAAATGGAAGATAACAAAAAAATTAGGCTAGAAGAAACTAAAATACCTGCTACAGAGATTTGTGAGGAGGCGTCCTTGAAAGAAAGTGGAAATAATAATGGGGAAATTTTGGCTGCAGATGAAATTAAAGAAGAAAGTGTTGTTACTTGTCAGGCTGATAATCCTCGGTCCAAGAATGGTGCTAAAATTGGTAGTGAGGACATTGAAAACTGTAAGGCTGACGGTGGGACAAGGGATAAGAAAACCTCACCAGCTCATTCTTTAGCAAGTGAGAATAATGTGAAGGAGAAGACTGGGAAACTCGGTGTTGAAAATACTTCAAATCCACATAAAACAGTTGCCAGAAAGGTAGAGGCGTACATTAAAGAACACATCAGACCTCTATGCAAAAGCGGTGTGATAACAGTGGAGCAATACAGATGGGCAGTGGGAAAAACCACAGATAAAGTTATGAGATACCATCAGAAAGCAAAGGATGCCAAGTTTCTAATTAAAGAAGGCGAAAAGGTGAAGAAACTCGCTGAACAGTACGTTGAGGCTGCTCCGAAGAAGAAAGAAAGTTAA

Protein

Gene

>Asa4G01392.1
ATGGGAGGATCTTCTGAAACTATAAGCAGTTGTATTGAAAAAAAGTCCATACTGAAAAAGACCAGTATTAAAAGCTTAACTTCGGAACAAACTggatgcagggagaacatgcgAATTTCAGATAAGGAAATGAATAGTCAGACTGACTTGTCAAAGATTGATAAAAAGAAATGGGCTATGGAGATTCTTGCTAGAAAAAACGCTTCATCAAATACGGGTAGCAATGCAGAGGAAGTAGAAGATAAATCTGCACTCAAGGGAAAATATCCTTTACTagtatgttaatatatgttttgaacATGAAAGTTTTATGTGCCTTTGAAAGAATGTTATggtcaatttacaacatatgtgGTATTTTTGATACTCGTAGGCACAGCTTCCTATGGAAATGCGGCCTGTACCAGAGCCTAGCCGGCACAATAAGGTTCCTCTTTCTGTTCGACAGGTATGTCTTGCGTATTATTAGTTTCTAAAATGAGAAGCGAGAAATCCTTGCATTAATCTTGCTTATAATGTTTCAATCATATATCGCTTAAACTAGTAGAGGTCAGTTTGCTAGACTTTCATTGTTATGGGCATATTAGCATATATTTGTAACTTAACTGGGTCATGGTATCCTGCTTAGCTATACTAGCACTGAACTATCAGAATATGCCACTACTTACAAAGATGAGTTGCATGCCAAGGATGCTTAAGAAATAAGATCAGGGAAAAAGAATTATTTCAAGTATAGGCTTCATTCCAAACTTATTTCAATACATCTGTTATTCACTTATCTGCATTTTACTCTAGTACATTCCTAAAATGCAAGAACAAATCTTAAGTTTGTACTTGCGCAAATTCCAAGTGCACAAGAATGTGCATGTACAAAAACATTGTATACTGGGAAAGAGGTTTATTTTCGTAGTAAGTTCCGAATGGGGCCTAAACTTGTAATGAGTTCTTTTTGGAGGCCTAGAATGAAAACTTATCCTAAGATTATTTAAGTAGCCATATTTTCCTTCTAATTAGCAATTTCACCATAACCATATTTATTTGCTACTTAAAAAAAGAGAGAGACATATTCTGAATGTTTATGCTCAAGTGCTTTTAGTTATTGGACGCATTGATTCTGAGCTTCACTTTTTTGTCCCACAAACATTCATgctcctttttttttaattaatcctGGTAGCTAGCCAACAACTTGATTTTGATATTGTATATGCTATTTCATGATTGAATCCTTGTCAATCCTGTAAATGTCAtatttacatgttaatttgtccctCATCCCTAAAATTCTGAGGCAATTATCTAAGGGGATGGTAGAAAGCTAATATATTTCCAAATAGTTTGGTCAATTTCAGTGATGCATTTAGCTCTAGTCTTTAGAGgacaattcaataaaaataagttttcttttatttccctCTTTCTGTGATTCGATTTTGTGGTTCTGTTCTGTTCATGTCATTCCCAATGCCAGGCACAACTGTATCGCATAACTGAACACTTCTTGAAGGCAACAAACCAAGCAGTCATTCGTAAAACTGCAGATACAGAACTAGCAATAGCCGATGCAGTTAACACAGAGAGaggaatttttgaaaaatcaagtaGCAAAGTAGTTTATGTTAATCTTTGTGCACAAATTTTACCTCAAAAATCTATCAAACCATCATCATATGAACCAGTGACATCTAGTCATTCAGCACCTACAGACGAAGTTAACAATCAAGTTGTAGAAGAAGCATTGAAACTAGCTGGTCTTTCATCCGATTCTCCTCCAGATAGCCCTTCCATACGTATGAAAATGTATCATAATGCAGAAAATAGTGGTAACGAGTATCAAATTCCTACCAATACAGATCCATGTAAAGATTTATCCATTTCTGTAGAAAAAGCATTGAAATTAGCTGGACTTTCATCTGATTCTCCTCCAAATAGTTCTTGTGCATCTATGGAACAGTATCCTAATGCAGAAGATACCACTAATGAATTTGGAATTCCTCCTGATAAGGATTCATGTAAAGATTTTTCTATTTTTGGGGAAGAGAATTGCGATGAACTCATAGGCACGCCAAAAGAATGTATTAAAGTTTCGGAACCAGGAGCTGCTTCATCAACTCCTGAATGTGACACAATACTAACATGTAAAGAGGAAGTCCATTCTGAAGGGAAAATGGAAGATAACAAAAAAATTAGGCTAGAAGAAACTAAAATACCTGCTACAGAGATTTGTGAGGAGGCGTCCTTGAAAGAAAGTGGAAATAATAATGGGGAAATTTTGGCTGCAGATGAAATTAAAGAAGAAAGTGTTGTTACTTGTCAGGCTGATAATCCTCGGTCCAAGAATGGTGCTAAAATTGGTAGTGAGGACATTGAAAACTGTAAGGCTGACGGTGGGACAAGGGATAAGAAAACCTCACCAGCTCATTCTTTAGCAAGTGAGAATAATGTGAAGGAGAAGACTGGGAAACTCGGTGTTGAAAATACTTCAAATCCACATAAAACAGTTGCCAGAAAGGTAGAGGCGTACATTAAAGAACACATCAGACCTCTATGCAAAAGCGGTGTGATAACAGTGGAGCAATACAGATGGGCAGTGGGAAAAACCACAGATAAAGTTATGAGATACCATCAGAAAGCAAAGGATGCCAAGTTTCTAATTAAAGAAGGCGAAAAGGTGAAGAAACTCGCTGAACAGTACGTTGAGGCTGCTCCGAAGAAGAAAGAAAGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264080.1	1.1e-86	uncharacterized protein At4g10930
Swissprot	Q8L7I1.1	6.6e-63	Uncharacterized protein At4g10930
trEMBL	A0A5P1EYB4	8.3e-87	PHD-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G10930.1	45.89	2e-43	173

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G01392	AT4G10930.1	231	106	6	9	222	445	673	45.89	2e-43	173
Asa4G01392	AT4G10930.1	70	14	0	460	529	904	973	80.00	4e-29	126

Ortholog group

Species	Genes
Allium cepa	g449822.t1
Allium fistulosum	AfisC4G01542
Allium sativum	Asa4G01392.1; Asa4G01393.1
Arabidopsis thaliana	AT4G10930.1; AT4G10940.1
Oryza sativa	LOC_Os12g10700.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF15870.2	EloA-BP1	Family	100	214	33.5	4.4e-08

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network