Detail information of Asa4G01813


Location
GeneChrStartEndStrand
Asa4G01813chr4488582004488582819+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOEL15645.11.8e-27Transcription factor TCP20
SwissprotQ9LSD5.11.7e-27Transcription factor TCP20
trEMBLA0A1E5US651.3e-27Transcription factor TCP20

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G27010.145.989e-34 140AT-TCP20;ATTCP20;PCF1;TCP20TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

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Ortholog group
SpeciesGenes
Allium cepag332752.t1
Allium fistulosumAfisC4G02343
Allium sativumAsa4G01813.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03634.10TCPFamily43149109.52.1e-31

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16221TCP21, CHE; transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)EC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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