Detail information of Asa4G01997


Location
GeneChrStartEndStrand
Asa4G01997chr4531353032531358682-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrCBI34644.31.5e-74unnamed protein product, partial
SwissprotQ39117.11.2e-63Trihelix DNA-binding protein GT-2
trEMBLA0A8T0N7L11.9e-74Trihelix transcription factor GT-2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G76890.244.675e-99 358AT-GT2;GT2Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag516782.t1
Allium fistulosumAfisC3G08459; AfisC4G02527; AfisC4G03219; AfisC6G03602; AfisC8G02803
Allium sativumAsa4G01997.1
Arabidopsis thalianaAT1G76890.2
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain3411777.76.1e-22
PF13837.3Myb_DNA-bind_4Domain32841582.42.1e-23

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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