Detail information of Asa4G02103


Location
GeneChrStartEndStrand
Asa4G02103chr4559592037559601623+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274241.12.0e-62MADS-box transcription factor 23-like isoform X3
SwissprotQ6EP49.21.3e-53RMADS218
trEMBLA0A1U7ZZD91.9e-59MADS-box transcription factor 23 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G37940.155.172e-71 265AGL21AGAMOUS-like 21

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag190630.t1
Allium fistulosumAfisC4G02002
Allium sativumAsa4G02103.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105783.35.3e-24
PF01486.14K-boxFamily8517091.52.6e-26

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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