Detail information of Asa4G02378


Location
GeneChrStartEndStrand
Asa4G02378chr4633527511633582257+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257482.10.0e+00protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
SwissprotQ7X9V2.10.0e+00Protein CHROMATIN REMODELING 13
trEMBLA0A5P1FBA70.0e+00Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G12810.155.520.01976chr13;PIE1;SRCAPSNF2 domain-containing protein / helicase domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag303582.t1
Allium fistulosumAfisC2G05546; AfisC2G05978; AfisC4G02775
Allium sativumAsa4G02378.1
Arabidopsis thalianaAT3G12810.1
Oryza sativaLOC_Os02g46450.1; LOC_Os02g46450.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07529.10HSADomain279356.52.4e-15
PF13892.3DBINODomain3416227.33.4e-06
PF00176.20SNF2_NFamily480754234.01.8e-69
PF00271.28Helicase_CFamily1003111570.61.2e-19

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11320EP400; E1A-binding protein p400EC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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