Detail information of Asa4G02487


Location
GeneChrStartEndStrand
Asa4G02487chr4667745761667755050+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263129.10.0e+00lysine-specific histone demethylase 1 homolog 3
SwissprotF4JLS1.10.0e+00Protein LSD1-like 3
trEMBLA0A6I9R2540.0e+00lysine-specific histone demethylase 1 homolog 3 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G16310.151.870.01241LDL3LSD1-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag155848.t1
Allium fistulosumAfisC4G03217
Allium sativumAsa4G02487.1
Arabidopsis thalianaAT4G16310.1
Oryza sativaLOC_Os10g38850.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04433.14SWIRMDomain51759040.91.7e-10
PF01593.21Amino_oxidaseDomain7621224349.43.8e-104

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0055114Poxidation-reduction process
GO:0016491Foxidoreductase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11450KDM1A, AOF2, LSD1; [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylaseEC:1.14.99.66 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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