Detail information of Asa4G02602


Location
GeneChrStartEndStrand
Asa4G02602chr4695864044695867565-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261979.16.8e-86MADS-box transcription factor 26-like
SwissprotA2YQK9.21.2e-63OsMADS26
trEMBLA0A804L9103.2e-69(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G71692.151.809e-50 193AGL12;XAL1AGAMOUS-like 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag344263.t1
Allium fistulosumAfisC2G06260; AfisC4G03334
Allium sativumAsa4G02602.1; Asa6G03659.1
Arabidopsis thalianaAT1G71692.1
Oryza sativaLOC_Os08g02070.1; LOC_Os12g10520.1; LOC_Os12g10520.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105683.06.7e-24
PF01486.14K-boxFamily8417277.75.1e-22

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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