result

Gene information

Detail information of Asa4G02842

Location

Gene	Chr	Start	End	Strand
Asa4G02842	chr4	750635889	750639064	-

Sequences

CDS

Protein

Gene

>Asa4G02842.1
ATGGTAAACTATTTTAAGGCAGACTCTAAAAGGTATTAGCGGTGAATGATTTTTGAGAAGAAAAGCTAAAACGGGAACGaaaattggattagaaatcaaAACCAGGAAATAAAAGTTGGGAATGAAGCATTTTTAGAAATATATGAAAGAGTtacaaatgaaattatttaaatatgtatggaaataataatttgcaACTCAACATTTAAATTTTCGAGATTTAGATTTCTTTTAGCAATTTCAAAACCGAAAAtttgaatattatgtaaaattaaaactTAGTTAATATGATATTATGCAGTATTTCCAGTATTTGCAAGATGACTTCTCAAATTAATGGTATGTTATTTTCAAGTCCAGTAATTTTAAGTTGCTGCTTAATTTTTAATTACTTGGATATTTTCAGTTCATTACAGAACTTCGATTATTTAGTTACGGGACTTTTTATAATCCAAGCAATTACGGAAGGTATATAACTTTTTAGGAGCAACATTATGCAACTTCTGTGTGATAATGACATTGGTGTCGGTTTTCCTAGGCTCCAGCATTTCTACATCAAGTTACCATTTTGTTTTGCATCCATGTTCTACAatctagtttttttatttttttttattttgtgcgcTATTACTGTACTGCAGATCAGGAGCAATAGAAAAAGGACAGCAGCCCCTCCAATGATGCATATGCGAGATTGCGAAGTGCCTTCAAGGTGCCCCttcaattattataagttataactatGAAATGCCTTCGGGTTTTTATTCTGTACTAAGTTTTGTCTTACTGTACTGATTTTGCAAGCGCTTTTATATCTGGTATTGTGCTGGTGGTTTTGGAATACTCCCATTGCAGCTGTTCCTCAACATCTTCTACACCCATTTGATAATTTCTTAGTTACCCGCATACCCACTAGTTGAAATTATGCGATTTTGGAAGTGTGAAAGTTTAGGTATGCTGTCCTTTGGGATTTAGTGATATGAAATTACTACTACTGTCtttgagaattttttttcttttgtccttTGTTTCTAAAGGTGAAAGGAGAGCCAAACATTTCATACATTTGCTTAAGATACTATAGATCTCCCGAGCTTATATTTGGTGCTACAGAGTGTACCACAATAATCGATGTCTGGTCTGCTGGTTGTGTCCTAGCCGCGCTGCTGCTTAGACAGGTTAATATTGCAAATATATTAGCTTTGACTTACTGCAAATTATCTACATAATACCTAAATTATCAAAAACTTGACTCATTTGCCTAATACCAGCCTTTGTTTCCTGGTGAGAGTGGAGTAGATGAGCTCGTTGATGTAATTAAGGTGATTTTTTATGTTTATATTCTTTTTTGGTTATTCAAATTGTTTGCACAAAGGTAAACGTAAGGTCAAGGCATGGGAAACCCCCTTTATCAGTTTGTATCTATGATAAGAAATCCCGATTTCTTTTCTCTTTGATGCAACGCTATTGCTCCTTTATGTTGCGTAGGAAACCTATATTTCTAGCTGGCTGATGCTTAGGATATTCTTATTACTGGCTTCGTTTAGATTTGCACATGCATGCACATCTATATTTCTCTAATGACTTTGATTCAACCTGCATGCACTAATCTTAATCCATCTTCATCCATTTACCATTTGGCAATAAATGTTATATTTGCTTATTTTATTCCAATCATACACAATATGTATATGATTTAAATCTATATCTAATATATTTCTTAACTTGGTCAGTGGCAGCTGATTGTTGTTTTACATTCCTTATTGTCTGTTGCAGGAAGCATTTCATTCCTTTtgcttattttaatttcatttagcATATTATTTTACTTGCAGTTTATGTGgttttgaattcaatatttctAGCTAGTTGAATTTTCCATCATGTTGATATTAGTTGTGTTTTCTTTGGTCATTTGCTAATATGCAAATTAGAGTCAAAGACTTTCTTGTCATTGTTCATCTTCTGCTTCATATAATTTGGGTAATGTTGTTGTACTGCATGCATATTCTATTATTTGATCACCCTTGATATCAgagtaggtcagacgtctgaaataaatttcagacgtctgaactaagCCTAGGATTTGTCCGAGAACATTTTCAGATGTCAAAAATAGTCTAAGGGTGTTGGATGAAATCCATAATAAATTTcccaactttttttcttttatgctTAATTATCAGGTTACGTTAAAGCTTAACTCTGTTTTACCAATCCCATTAATACTACGCGTTTAATTATTAACTGTATGTGAatttctaaactagttcatttgcAGTCGTAATTTGAACTTCCACATTTAGCAGTATGTTTGTTGAATGCCACTAATTTTCTCGCTTGCACATCAGAATAATACATACTCAGCTTGGCGCTGCAGAAAACTAACAAACAAACGAGTGAACTTTTGGGAAGGTGCCATGCATCTAAATTTGTATagttattctcttttttttttgaaatattggttGGAGTATGTAATAGATTAAGGTAGTCAAACATCAACCTGTGTTTACTTATGACAAACAATGTTTCATCTATTTGGTAAGCAGGTTGTTTATTTCATCAATTCTAGTACTAAAGCAAACAAATTAGCAATTATTTGGTAAGTTGGATTGAAGtccaaataataattaatttaattaactatgaaAGCTACTATGTATCTCATTTACCCACTATATTATTTCTGTTTTCGGATATGTTACACTGCGTGTTCAGACTCCAGATGTAGGACGTTAGTCAgtatatgttttattgtttgatGTCACACTAGCATGTTACCAAATTAATTATGCAGCCATGTTGACCAACTATCGTCACAGATCAAAGAGCAAAGACTTTTGTTTTCTAAGACATTCAATGGAGACTTAACTGAATCTCAAAACCAGCCATTTGACGATTGGACTGAGCTTAAAACGAGTCATAGATAAGTTGAGTTCTCATAATAAATATTTGTAGTGTGGTTGCAGATGCTCCACTTTAGTGGTAAAGTTCACCACGGTGGTGCACTGCACCGCTTTAGTGGTGCAGATGCACCACAAAGTGGTGCTGCTGCACCATATATATTGCAGTGGTGCAGCAGCACCATTCTGTGGTGCATCTGCACCACTGCGGCGGTGTACCAATATAGTGCATTTGCACCACAgcagtggtgcaaatgcaccatatGA

Functional annotation

Database	accession number	e-value	annotation
nr	KAF6982480.1	1.3e-14	hypothetical protein CFC21_000860
Swissprot	P43289.1	4.5e-17	Shaggy-related protein kinase 12
trEMBL	A0A8K0IYK0	4.0e-15	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G05840.1	80.00	9e-20	91.7	ATSK12	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G02842	AT5G26751.1	55	10	1	1	55	220	273	80.00	9e-20	91.7
Asa4G02842	AT3G05840.1	55	10	1	1	55	224	277	80.00	9e-20	91.7
Asa4G02842	AT3G05840.2	55	10	1	1	55	224	277	80.00	9e-20	91.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	8	52	32.4	5.3e-08

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K03083	GSK3B; glycogen synthase kinase 3 beta	EC:2.7.11.26	ErbB signaling pathway	ko04012
			Wnt signaling pathway	ko04310
			Hedgehog signaling pathway	ko04340
			Hedgehog signaling pathway - fly	ko04341
			Hippo signaling pathway	ko04390
			PI3K-Akt signaling pathway	ko04151
			mTOR signaling pathway	ko04150
			Cell cycle	ko04110
			Focal adhesion	ko04510
			Signaling pathways regulating pluripotency of stem cells	ko04550
			T cell receptor signaling pathway	ko04660
			IL-17 signaling pathway	ko04657
			B cell receptor signaling pathway	ko04662
			Chemokine signaling pathway	ko04062
			Insulin signaling pathway	ko04910
			Prolactin signaling pathway	ko04917
			Growth hormone synthesis, secretion and action	ko04935
			Thyroid hormone signaling pathway	ko04919
			Melanogenesis	ko04916
			Dopaminergic synapse	ko04728
			Neurotrophin signaling pathway	ko04722
			Axon guidance	ko04360
			Circadian rhythm - fly	ko04711

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network