Detail information of Asa4G03108


Location
GeneChrStartEndStrand
Asa4G03108chr4831910245831919195-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247777.10.0e+00auxin response factor 12-like isoform X1
SwissprotQ258Y5.12.9e-266OsARF8
trEMBLA0A5P1E5F30.0e+00Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G37020.159.140.0 875ARF8;ATARF8auxin response factor 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag12592.t1; g310582.t1; g368194.t1; g430391.t1; g486722.t1
Allium fistulosumAfisC4G03920; AfisC5G07026; AfisC7G04154; AfisC8G04152
Allium sativumAsa0G02535.1; Asa3G01681.1; Asa4G03108.1
Arabidopsis thalianaAT1G30330.1; AT1G30330.2; AT5G37020.1; AT5G37020.2
Oryza sativaLOC_Os02g06910.1; LOC_Os04g57610.1; LOC_Os04g57610.3; LOC_Os06g46410.1; LOC_Os06g46410.2; LOC_Os12g41950.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family12722876.61e-21
PF06507.10Auxin_respFamily253336111.12.1e-32
PF02309.13AUX_IAAFamily64673430.43e-07

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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