Detail information of Asa4G03177


Location
GeneChrStartEndStrand
Asa4G03177chr4857061211857061793+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008788666.19.4e-49zinc finger CCCH domain-containing protein 56-like isoform X2
SwissprotQ84UQ3.11.0e-47Zinc finger CCCH domain-containing protein 56
trEMBLA0A8K0IJ701.8e-49Zinc finger CCCH domain-containing protein 56

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G35430.152.212e-29 124Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag133578.t1; g39331.t1
Allium fistulosumAfisC2G00951; AfisC2G05550; AfisC6G00866
Allium sativumAsa4G03177.1; Asa5G00972.1
Arabidopsis thalianaAT1G32360.1; AT2G35430.1
Oryza sativaLOC_Os08g06330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily729743.61.7e-11

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15308TTP; tristetraprolinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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