result

Gene information

Detail information of Asa4G03241

Location

Gene	Chr	Start	End	Strand
Asa4G03241	chr4	878784666	878788153	+

Sequences

CDS

Protein

Gene

>Asa4G03241.1
ATGAGAAGAATGATAGTGATAATAGTCATTTTGTTGTCTTCGATGGAAATATCAACAGCTCATGGTTCAAAAGAATGCAATCCTTCCATATGCGGGAATCAATCCATAAGCTCTCCGTTTACATTAAAAGGCGTTCCTTCCAACTGTAGTGGAGACGAGAAGTACAAACTGTCGTGTATTGGAAGCAAAACATTCATGGCAGCTCCTTTTGATAAGTATCTTGTTACCAACATATTTTATGAGAATAACAGTATTGACATAGTTGACGTGGAGTTAGCAAGTGGCAAGTGCCGTCTCCCTTCGCAAGATGTAACTCCCACTTTCTTCCCAAAGGGGTTTTATTTCACAGAATATTGGTGGTGGACTGGGTTCATAAACTGTTCGGAAAACCTAGACAAGAACTTGTCGGCGACAGCAATTCCCTGCCTTAGTCAGAAAAACAAGTTCATTTATGCTATACCTTTTGCTATGGTTAATTCTTCTTATGTTGTATCATGTACTTACTTGACTATGGTTCCTACTATGCTATCTGGTGTGGATTTGTACAACGATGGAGATGGTATATTTGGAATCATGAAGAATGGGTTCGCCCTTTCATGGTCAACGGGCGAGGAAATCCCAATTAGATCCAAAATCATCCATCATCATTGCCTTACTCAAGCTGTATCGTAAGTGGCCATGTTATCTCAATCTTCAATCTTCCTGGTATCTCTTATTCACCAAATTTTAGTTTCTTGAGTGCACCAAATTATTAATTACCTCCACCTAATATTTGTTTCACGTTAGAACAGTTGTATTAACTATTTAAGCAATCATACAAAAAATATAACCCATTCAAACTTCGAGCGAGAAACATAATTATGACGAAAGTAAAATCTTCAATGTACATTATATAAGCATGATCTTGCTACCTTATATTGCAGGCTAGCTAGGAAGCACACCAATTGGTCAGAATATTTCACCCGactcaaatatctatttcaaattgaGTCTGAATTCCAAAATTGCACTCAGGAAAACTGGGATTCTACTGCTTATGGATACTTGATTGCTATTGTTGTGCTCATCGGTGTCATATTTTTGTACTTAGGTAATCGCTTCAACATCTTACTCACAAGCGAAATTACAATgccatgtcttttttttttttgtgatacaGTGAACAAAACTGAATTGACGGTCAACTAACCAAAAGATGGTATGCCTTTAccttgatataatttttttttcattttctttttgcaGCAATTATCACGCTCGGAAGACTTACAGTTGCCCCTCTATGTATATTTGTCTTCCTCCtctatgaattattaaaaatgctTTCTCCTATCGATAACATAGAAAAGTTTCTACGGAACCAACAACGAGCAAGACTAACACGGTATGGGTATGCTGACATAATCGCAATGACAAGCCATTTCAAAGAACGATTAGGTCAAGGAGGATTTGGAACGGTTTACAAAGGAGAACTGCCTGGGGGTTATTTTGTTGCAGTCAAATTATTGGGTAAATCAAATGATAACGGCGAAGATTTTATCAACGAAGTGTCCACCATTGGTACGATTCATCATACTAATATTGTTCGATTGACTGGGTTTTGCTCAGAAGGTTTACGTAGAGCTCTGGTTTATGAGTACATGTATAATGGATCCCTCGATAAGTATATTTTTTCTTCAACTAGGAAATTCACCATAACTAAGCTGAATGAGATAGCCATTGGCGTGGCACGGGGAATTGATTATTTACATCGAGGATGTGACATGAGGATTCTTCATTTTGATATTAAGCCTCATAATATACTCCTGGATAGTAATTTCAGCCCGAAAGTTTCTGATTTCGGACTTGCAAAACTTTATTCAAGAGACAATAGCTTGGTTTCTACCTTCGCAGCAAGAGGTATGGTCAGGAAACAACTTATAATCCTATCAACtgacaatttgaaaatgaatacatATTTTGGTGTTACAACATCCGCTATCTATCATCtttgtgatttttttttcatttctttattcCAAAAGGATAGCACAATGctattgtttatataatatatgctTTCACTTGCAAACCAAACAGAACATGGGGTACTGCCAAATTAAGTGTTGAATGTTAACGGGccaaacatgatttttaatgttcTAAAAGGTGCACCaaaatttgttaatgaaaatatccTATTGTCAAGTATTTTTTACTTAAATTATTAGTGGCGTAGCCAGGAATTccggattggggggggggggggggggcaagaaatTAAATACGGAGGTTCGGAGGCGGTAGCCGCCGGAAAAAAAAAATTCCCATCCCAAATTTACACAACAAAATATTAGTTCTACAACCAAAAGTTGAAGCAACAACCCATTTTAGCCAATCAATTTTGTCAATCAATTATCCAAATCATGCGAAAGCAGCTAAATTAATTCAGTTGCTTAAAACTAAGCATACCAATTAGTCAATCAGAAGACCAACTCTAAAATCATGCAACAGCTAATAACCAAAATTATGCAAAATTAAGGAAGAACAAATCGAATATTACCTAGACCTGGAGGCTGGGTCGATGGCTCAGCAGAGATGAACAAATCGATGTTGTAAAGGGACTGAGGGAGGCGCAGGCGCGCAGCAGGCAGCAGCTCTTCTAGGATTTCAACTTTTCAGGCTTCGACTTCGTCTTCTAGGAGATCGGTTTCAGGCTTCGACTGAGGACATTGGTTTCAGACTTCGACTGAGGAGATcggtttctattttttttctttttccttccttcGTTGCGTTCTGTTATGCAGACAGGATTTTTTTTTTCGTTGTTTGAAttccgggggggagggggggggggtggttacGTGCCCAGGTCAGAGCAAACGTGGCTCCGCCCCTGACGCTGTAGTAATATTCTAAGCAAATTCAATTCATGCCAACACCACACGCAACTTTCATATTCAATACATCCATAAAAACATGTTTCTACttaattaattatgtataaatTCCTGTCCACACatttctttaaaatgaatttactCACAACAGGTACTACTGGGTACATGGCACCTGAACTTATTTCGAGAAGTTTTGGACCAATATCTTACAAGTCCGACGTGTATAGTTTTGGGATGCTGCTTCTAGAAATGGCAGCTGGAAGAAGAAACTATGACTCACGGGCAGAGAATTCTTGTGAAGCTTACTATCCCTCATGGATTTATGACCGACTGAATAAAACAACAAATTTAGAAGTATTGGATCATAAGATCGAGCCTACAGACATTGAAGTGAAATTGTGTAAAGTAGGATTATGGTGTATTCAAATGTCACCATCTTCCCGCCCCACTATGCAAAGAGTTCTAGAAATGTTGGAAGGTGATGTCACAGACGTAGAAATGCCTCCGAAGCCTTTCTTTTTCTGTTCTTCTGACCATTCTACAATGGGACATAATTCATTTCACATGTGTTCTAATGAAATATCGACCATACATGAGAGTGAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251698.1	4.2e-184	rust resistance kinase Lr10-like isoform X1
Swissprot	P93604.1	5.6e-101	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	A0A5P1FW25	1.2e-175	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G38260.1	48.04	1e-85	314		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G03241	AT5G38260.1	358	170	6	265	617	261	607	48.04	1e-85	314
Asa4G03241	AT1G66930.1	413	212	10	221	619	235	637	42.86	2e-85	313
Asa4G03241	AT1G66920.2	355	180	5	280	622	244	597	45.63	1e-84	311

Ortholog group

Species	Genes
Allium cepa	g136913.t1; g280171.t1; g52995.t1
Allium fistulosum	AfisC2G00223; AfisC2G00233; AfisC2G00249; AfisC2G00258; AfisC2G00286; AfisC2G00298
Allium sativum	Asa0G02049.1; Asa1G03947.1; Asa2G04946.1; Asa4G03239.1; Asa4G03241.1; Asa5G00172.1; Asa5G00217.1; Asa5G00610.1; Asa5G00663.1; Asa5G00666.1; Asa5G00704.1; Asa5G00708.1; Asa5G01144.1; Asa6G04684.1; Asa6G04685.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g02300.1; LOC_Os01g02320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	337	602	167.2	4e-49

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network