Detail information of Asa4G03433


Location
GeneChrStartEndStrand
Asa4G03433chr4934615519934615746-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK82126.19.7e-24uncharacterized protein A4U43_C01F36380
SwissprotF4JVB8.13.6e-23Protein RADIALIS-LIKE SANT/MYB 2
trEMBLA0A5P1FUX57.0e-24SANT domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G39250.163.772e-24 107ATRL1;RL1;RSM2RAD-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag195354.t1; g20742.t1
Allium fistulosumAfisC5G01769; AfisC5G01925; AfisC5G05648
Allium sativumAsa4G01725.1; Asa4G03433.1; Asa4G03434.1; Asa4G05707.1; Asa5G00207.1; Asa8G03239.1; Asa8G03240.1; Asa8G03241.1
Arabidopsis thalianaAT1G75250.2; AT2G18328.1; AT2G21650.1; AT4G39250.1
Oryza sativaLOC_Os01g44390.1; LOC_Os01g44390.2; LOC_Os05g50340.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain54927.32.6e-06

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01184E3.2.1.15; polygalacturonaseEC:3.2.1.15 Pentose and glucuronate interconversionsko00040

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.