result

Gene information

Detail information of Asa4G03540

Location

Gene	Chr	Start	End	Strand
Asa4G03540	chr4	972756398	972758776	-

Sequences

CDS

>Asa4G03540.1
ATGGCGGATTCTTCTTCCTCTTCATCATCCTCAATTATCAACGTAATATTAATTCTTTCCTCTCTTCATGTCATATTTGCACAAAAATCCAACAACATATCATCCTTCACAACCCAAGACTCCCCATGGTTACCCACCCAGACCAAAACCCTCTTCTCCCCGAGCCAAACATTCGCAGCCGGATTCCGAAAAGTCCCAAATAGCTCCTCCTACACTTTCTCAATCTGGTTTCAAAAGTCCAAGGACAAAACCGTAATCTGGTCGCTTAATCAACCAGTCCCACCTTCCTCTCCCCTCACAATATTACCCAACGGCACCCTTTTCCTCCCCGGTCCGCCCGGTGGGCCCAAAAACCTCTTCCCTGAAACCGCACGTGCACAGTCCGACCCTGCTCTTTCCATTTCCGAAAAAGGGGAGCTCACATTTGGGAACTGGTCCAGCTTCGACTCACCCACCGACACCCTCCTACCCAACCAACCCATCATCCCCACCCACAGCCTCATTTCCTCAAACAATAAGTACGCACTAGTTAACGCCTCCGCACTAGTGTTCAATAGAACAGAAACGTACTGGTCAGTGTATGCCACTCCAAATCCCACTTCCTTCACCAATCTAACAACCGACGGCTTTCTGCACAAAGCCGATTCATCGACCTACCAAATGTCTGACGTTGGCAATAGCAACATCGCCCGGCGACTAACCCTTGACCCAGATGGAAACATCCGGGTTTACAGCTTAAACAATGCTTCCGGCGCATGGAAAGTCGTCTGGCAAGCAGTCATTGAGCAGTGCACAATCAAGGGAATTTGCGGGGACAACTCAGTTTGTGTTCCTAGCGGAAACGGAAACACTACGACTTGTGTTTGCCTCCCCGGATATAATGTCAATCGGGTTCAAGGGTGTAATATAAAGAAGAAAATTTCAAATGGTGGTAAGTTCTTGAGGCTTGACTATGTAGTGTTCCTGAACGATGTGGCGTATGTGAACAACACGGAGTATGTGAAGTATAGTCCAGTCAACTTTGACATTTGTCGATCGAGGTGTATGAAAAGTACGAGTTGTGTGGGGTTTACATACACATTTAACGGGAACCGTGATTGCTTTAATTGGTTTAAGACGTTGAGGTACGGGTATTGGTCGCCGGGCAGCGAGAAGTCGACCTTCTTGAAGGTGGATTCATCGGAAGTGGACGTTTCTGATTTCACCGGCATGACGTCGATGATCGACACTACTTGTCCGGTTAAGATAAGCCTGCCAGTACCCGAACGTGACTCGAAGACGACTGCTAGGAATCTAGCGATCATCGGGACATTGTTCGCTTTGGAGCTAACTGCGGGGATTTTGTCGTTTTGGGCATTTTTAAGGAGGTACTCAAAGTACCGAGACATGGCACGAACGTTCGGACTCGAGTTCCTACCGGCCGGAGGGCCGAAGCGGTTTTCGTATGCCGAGTTGAAAGCTGCAACAAACGATTTCTCGAACGTCGTAGGGAGAGGTGGGTTTGGAATCGTGTATAGAGGAGAGCTTCACGATGGACGGATCATAGCGGTTAAGAAACTGAAGAATGTGGAAGGGGTAGCTGAGGCGGAGTTCTGGGGCGAGGTCACGATTATCGCGAGGATGCATCATTTGAACCTCGTGAGGATGTGGGGGTTCTGCGCAGAGAAGGAGCAGAGGATGCTGGTTTACGAGTACATACCGAACGGGTCCTTGGATAAGTTCTTGTTTCACGACGAATCGGGGAAAGACGTGAAGTTGGATTGGGGGATAAGGTACAGGATCGCCCTAGGAGTAGCGCGAGCAATCGCCTATTTGCACGAAGAGTGTCTTGAGTGGGTCCTACATTGTGATATCAAGCCGGAGAATATTCTTCTGGAGGATGACTTCTGCCCTAAAGTGTCGGACTTCGGCCTATCAAAACTTACAAACAAGAAGGACATAGTGGCTATGTCGAGGATGCGTGGGACGCGTGGGTACATGGCTCCAGAATGGGTGACAACACATAGGGAGCCTATAACGGCTAAGGCCGATGTGTATAGTTTTGGGGTGGTTCTTTTAGAAATTGTTACGGGTAGGAGGAGCAGTAAATTTCAGAGGGCTTCAATGGATAGTGAGGATTGGTACTTCCCAAGATGGGCGTATGAGAAGGTTTATGTAGAGAAGCGGGTTGAAGATATGCTAGACCCGGTAATTTTGGGGAGTTACGATGATAGGGAGCATTTCGGCATGGTTGAAAGAATGGTTAAAACTGCAATGTGGTGTTTGCAGGATAAAGCTGAAACAAGGCCATCAATGGGGAAAGTGACGAAAATGCTTGAAGGGTCTGTGGAAATTACTGAACCAGGAAGGCCTTCTATTTTTTACCTTGGAGATGAATGA

Protein

Gene

>Asa4G03540.1
ATGGCggattcttcttcctcttcatcatcCTCAATTATCAACGTAATATTAATTCTTTCCTCTCTTCATGTCATATTTGCACAAAAATCCAACAACATATCATCCTTCACAACCCAAGACTCCCCATGGTTACCCACCCAGACCAAAACCCTCTTCTCCCCGAGCCAAACATTCGCAGCCGGATTCCGAAAAGTCCCAAATAGCTCCTCCTACACTTTCTCAATCTGGTTTCAAAAGTCCAAGGACAAAACCGTAATCTGGTCGCTTAATCAACCAGTCCCACCTTCCTCTCCCCTCACAATATTACCCAACGGCACCCTTTTCCTCCCCGGTCCGCCCGGTGGGCCCAAAAACCTCTTCCCTGAAACCGCACGTGCACAGTCCGACCCTGCTCTTTCCATTTCCGAAAAAGGGGAGCTCACATTTGGGAACTGGTCCAGCTTCGACTCACCCACCGACACCCTCCTACCCAACCAACCCATCATCCCCACCCACAGCCTCATTTCCTCAAACAATAAGTACGCACTAGTTAACGCCTCCGCACTAGTGTTCAATAGAACAGAAACGTACTGGTCAGTGTATGCCACTCCAAATCCCACTTCCTTCACCAATCTAACAACCGACGGCTTTCTGCACAAAGCCGATTCATCGACCTACCAAATGTCTGACGTTGGCAATAGCAACATCGCCCGGCGACTAACCCTTGACCCAGATGGAAACATCCGGGTTTACAGCTTAAACAATGCTTCCGGCGCATGGAAAGTCGTCTGGCAAGCAGTCATTGAGCAGTGCACAATCAAGGGAATTTGCGGGGACAACTCAGTTTGTGTTCCTAGCGGAAACGGAAACACTACGACTTGTGTTTGCCTCCCCGGATATAATGTCAATCGGGTTCAAGGGTGTAATATAAAGAAGAAAATTTCAAATGGTGGTAAGTTCTTGAGGCTTGACTATGTAGTGTTCCTGAACGATGTGGCGTATGTGAACAACACGGAGTATGTGAAGTATAGTCCAGTCAACTTTGACATTTGTCGATCGAGGTGTATGAAAAGTACGAGTTGTGTGGGGTTTACATACACATTTAACGGGAACCGTGATTGCTTTAATTGGTTTAAGACGTTGAGGTACGGGTATTGGTCGCCGGGCAGCGAGAAGTCGACCTTCTTGAAGGTGGATTCATCGGAAGTGGACGTTTCTGATTTCACCGGCATGACGTCGATGATCGACACTACTTGTCCGGTTAAGATAAGCCTGCCAGTACCCGAACGTGACTCGAAGACGACTGCTAGGAATCTAGCGATCATCGGGACATTGTTCGCTTTGGAGCTAACTGCGGGGATTTTGTCGTTTTGGGCATTTTTAAGGAGGTACTCAAAGTACCGAGACATGGCACGAACGTTCGGACTCGAGTTCCTACCGGCCGGAGGGCCGAAGCGGTTTTCGTATGCCGAGTTGAAAGCTGCAACAAACGATTTCTCGAACGTCGTAGGGAGAGGTGGGTTTGGAATCGTGTATAGAGGAGAGCTTCACGATGGACGGATCATAGCGGTTAAGAAACTGAAGAATGTGGAAGGGGTAGCTGAGGCGGAGTTCTGGGGCGAGGTCACGATTATCGCGAGGATGCATCATTTGAACCTCGTGAGGATGTGGGGGTTCTGCGCAGAGAAGGAGCAGAGGATGCTGGTTTACGAGTACATACCGAACGGGTCCTTGGATAAGTTCTTGTTTCACGACGAATCGGGGAAAGACGTGAAGTTGGATTGGGGGATAAGGTACAGGATCGCCCTAGGAGTAGCGCGAGCAATCGCCTATTTGCACGAAGAGTGTCTTGAGTGGGTCCTACATTGTGATATCAAGCCGGAGAATATTCTTCTGGAGGATGACTTCTGCCCTAAAGTGTCGGACTTCGGCCTATCAAAACTTACAAACAAGAAGGACATAGTGGCTATGTCGAGGATGCGTGGGACGCGTGGGTACATGGCTCCAGAATGGGTGACAACACATAGGGAGCCTATAACGGCTAAGGCCGATGTGTATAGTTTTGGGGTGGTTCTTTTAGAAATTGTTACGGGTAGGAGGAGCAGTAAATTTCAGAGGGCTTCAATGGATAGTGAGGATTGGTACTTCCCAAGATGGGCGTATGAGAAGGTTTATGTAGAGAAGCGGGTTGAAGATATGCTAGACCCGGTAATTTTGGGGAGTTACGATGATAGGGAGCATTTCGGCATGGTTGAAAGAATGGTTAAAACTGCAATGTGGTGTTTGCAGGATAAAGCTGAAACAAGGCCATCAATGGGGAAAGTGACGAAAATGCTTGAAGGGTCTGTGGAAATTACTGAACCAGGAAGGCCTTCTATTTTTTACCTTGGAGATGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258564.1	3.0e-277	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
Swissprot	Q9FLV4.1	1.4e-101	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080
trEMBL	A0A444F0S5	5.8e-270	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	34.79	1e-101	368		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G03540	AT1G34300.1	776	411	28	53	784	44	768	34.79	1e-101	368
Asa4G03540	AT2G19130.1	792	448	21	49	784	36	778	30.18	1e-87	322
Asa4G03540	AT4G00340.1	789	423	27	49	774	31	761	31.05	2e-83	307

Ortholog group

Species	Genes
Allium cepa	g288714.t1; g74102.t1; g74103.t1
Allium fistulosum	AfisC5G03618
Allium sativum	Asa4G03540.1
Arabidopsis thaliana
Oryza sativa	LOC_Os10g01100.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00954.17	S_locus_glycop	Domain	205	294	41.1	1.9e-10
PF08276.8	PAN_2	Domain	322	374	23.7	3.3e-05
PF00069.22	Pkinase	Domain	494	768	159.1	1.2e-46

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network