Detail information of Asa4G03695


Location
GeneChrStartEndStrand
Asa4G03695chr410188580761018863954-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA59158.11.9e-132Homeobox protein knotted-1-like 3
SwissprotO04136.19.3e-129KNAP3
trEMBLA0A835VMH93.8e-135Homeobox protein knotted-1-like 3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G25220.284.256e-135 477KNAT3KNOTTED1-like homeobox gene 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag109917.t1; g6046.t1
Allium fistulosumAfisC2G07493
Allium sativumAsa4G03695.1; Asa6G00294.1
Arabidopsis thalianaAT5G11060.1
Oryza sativaLOC_Os02g08544.1; LOC_Os02g08544.2; LOC_Os06g43860.1; LOC_Os06g43860.2; LOC_Os08g19650.1; LOC_Os08g19650.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03790.10KNOX1Family569763.41.1e-17
PF03791.10KNOX2Family11916769.61.1e-19
PF03789.10ELKDomain22524627.91.6e-06
PF05920.8Homeobox_KNFamily26530463.89.1e-18

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15613MEIS1; homeobox protein Meis1EC:- Signaling pathways regulating pluripotency of stem cellsko04550

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.