Detail information of Asa4G03916
Location Gene Chr Start End Strand Asa4G03916 chr4 1082621194 1082635590 -
Sequences
Functional annotation
Database accession number e-value annotation nr XP_020272208.1 0.0e+00 lysine-specific demethylase 5A Swissprot Q9CWW7.1 6.4e-05 PHD finger and CXXC domain-containing protein 1 trEMBL A0A8K0N840 1.8e-291 Putative lysine-specific demethylase
Best hit in Arabidopsis
TAIR id % identity e-value bit gene aliases Short description AT1G63490.1 31.21 4e-50 197 transcription factor jumonji (jmjC) domain-containing protein
>>>Show top 3 blast result
Query id Subject id alignment mis gap openings query query subject subject % identity e-value bit Asa4G03916 AT1G63490.1 439 273 5 1 417 558 989 31.21 4e-50 197 Asa4G03916 AT1G63490.1 137 69 2 701 836 917 1052 48.18 7e-32 136 Asa4G03916 AT4G39100.1 75 40 3 787 857 136 203 32.00 3e-06 51.2
Ortholog group
Pfam domain Pfam ID Pfam name type alignment_start alignment_end bit_score Evalue PF08429.8 PLU-1 Family 8 121 38.6 6.1e-10 PF08429.8 PLU-1 Family 87 286 75.0 5.3e-21 PF08429.8 PLU-1 Family 307 492 31.9 6.8e-08 PF00628.26 PHD Domain 792 836 34.5 1.3e-08
Gene Ontology Accession Ontology Name GO:0005515 F protein binding
GO:0055114 P oxidation-reduction process
GO:0008270 F zinc ion binding
GO:0016706 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
KEGG pathway KO Name Enzyme ID Pathway Pathway ID K11446 KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylase EC:1.14.11.67 - -
Expression pattern in different tissues
Expression pattern in BioProjects
Co-expression network
