Detail information of Asa4G04128


Location
GeneChrStartEndStrand
Asa4G04128chr411328058251132820092-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrCAB3465325.12.4e-180unnamed protein product
SwissprotB9DHT4.23.2e-145ARM REPEAT PROTEIN INTERACTING WITH ABF2
trEMBLA0A1E5WAQ12.5e-179Arm repeat protein interacting with ABF2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G19330.165.810.0 832ARIAARM repeat protein interacting with ABF2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag512225.t1
Allium fistulosumAfisC5G03168; AfisC8G01030
Allium sativumAsa1G04008.1; Asa4G04128.1
Arabidopsis thalianaAT5G19330.1
Oryza sativaLOC_Os05g33050.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00514.20ArmRepeat19222732.64.8e-08
PF00514.20ArmRepeat23026932.26.7e-08
PF00651.28BTBDomain50059990.19.2e-26

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12585DIS3, RRP44; exosome complex exonuclease DIS3/RRP44EC:3.1.13.- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.