Detail information of Asa4G04225


Location
GeneChrStartEndStrand
Asa4G04225chr411643292171164329720+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF5959458.11.5e-08hypothetical protein HYC85_000667
SwissprotQ9LFG0.16.8e-06Zinc finger protein ZAT18
trEMBLA0A7J7I5Q91.1e-08C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G28710.146.327e-24 106C2H2-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag134102.t1; g342744.t1; g433211.t1; g494350.t1; g494354.t1; g494363.t1; g514836.t1
Allium fistulosumAfisC1G06524; AfisC1G06527; AfisC1G06528; AfisC1G06529; AfisC1G06530; AfisC5G04403
Allium sativumAsa0G04218.1; Asa0G04814.1; Asa4G04225.1; Asa7G02954.1; Asa7G02977.1; Asa7G02979.1; Asa7G02980.1; Asa7G02981.1; Asa7G02982.1; Asa7G02983.1; Asa7G02984.1; Asa7G02985.1; Asa7G02989.1; Asa7G02990.1; Asa7G02999.1
Arabidopsis thalianaAT2G28710.1; AT3G53600.1; AT5G59820.1
Oryza sativaLOC_Os03g17150.1; LOC_Os05g02390.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain386341.48.7e-11
PF13912.3zf-C2H2_6Domain8310634.71.1e-08

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14841NSA1, WDR74; ribosome biogenesis protein NSA1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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