Detail information of Asa4G04330


Location
GeneChrStartEndStrand
Asa4G04330chr411985663331198584729-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAQK91648.15.2e-137Putative chromatin-remodeling factor family
SwissprotQ7G8Y3.29.5e-136Sucrose nonfermenting protein 2 homolog
trEMBLA0A8T0RTN41.5e-138Chromatin-remodeling complex ATPase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G06400.162.799e-147 517CHR11chromatin-remodeling protein 11

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Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily8717735.44.4e-09
PF00271.28Helicase_CFamily22932142.37.3e-11
PF09110.8HANDDomain46851034.32.9e-08

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding
GO:0031491Fnucleosome binding
GO:0043044PATP-dependent chromatin remodeling

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11654SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5EC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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