Detail information of Asa4G04610


Location
GeneChrStartEndStrand
Asa4G04610chr412552438071255244555-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252247.14.0e-33growth-regulating factor 1-like isoform X2
SwissprotQ6AWY8.11.4e-22Transcription activator GRF1
trEMBLA0A5P1FJN53.9e-30Growth-regulating factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G13960.150.911e-22 103AtGRF5;GRF5growth-regulating factor 5

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Ortholog group
SpeciesGenes
Allium cepag484464.t1
Allium fistulosumAfisC5G02562
Allium sativumAsa4G04610.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain134540.02.2e-10
PF08879.7WRCDomain7211257.95.8e-16

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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