Detail information of Asa4G04752


Location
GeneChrStartEndStrand
Asa4G04752chr412974027441297413071-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256822.11.7e-87homeobox-leucine zipper protein ROC8-like isoform X1
SwissprotQ9LMT8.12.4e-73Protein HOMEODOMAIN GLABROUS 12
trEMBLA0A5P1FA691.3e-87Homeobox-leucine zipper protein HDG11-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G73360.132.622e-77 286AtEDT1;ATHDG11;EDT1;HDG11homeodomain GLABROUS 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag342037.t1; g342050.t1; g436788.t1; g436805.t1; g92394.t1
Allium fistulosumAfisC1G04029; AfisC1G05844; AfisC5G01864
Allium sativumAsa4G04746.1; Asa4G04748.1; Asa4G04750.1; Asa4G04752.1; Asa4G04755.1; Asa4G04756.1; Asa4G04757.1; Asa7G00687.1; Asa7G03531.1; Asa7G03533.1; Asa7G03536.1; Asa7G07700.1; Asa7G07701.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g47130.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain24035.84.9e-09
PF01852.16STARTDomain19636477.77.1e-22

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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