Detail information of Asa4G04756


Location
GeneChrStartEndStrand
Asa4G04756chr412985203131298528148-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256822.15.5e-123homeobox-leucine zipper protein ROC8-like isoform X1
SwissprotQ9FX31.12.3e-97Protein HOMEODOMAIN GLABROUS 11
trEMBLA0A5P1FA694.0e-123Homeobox-leucine zipper protein HDG11-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G73360.135.011e-101 367AtEDT1;ATHDG11;EDT1;HDG11homeodomain GLABROUS 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag342037.t1; g342050.t1; g436788.t1; g436805.t1; g92394.t1
Allium fistulosumAfisC1G04029; AfisC1G05844; AfisC5G01864
Allium sativumAsa4G04746.1; Asa4G04748.1; Asa4G04750.1; Asa4G04752.1; Asa4G04755.1; Asa4G04756.1; Asa4G04757.1; Asa7G00687.1; Asa7G03531.1; Asa7G03533.1; Asa7G03536.1; Asa7G07700.1; Asa7G07701.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g47130.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain24036.82.2e-09
PF01852.16STARTDomain18941094.45.5e-27

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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