result

Gene information

Detail information of Asa4G04783

Location

Gene	Chr	Start	End	Strand
Asa4G04783	chr4	1307299587	1307301017	-

Sequences

CDS

Protein

Gene

>Asa4G04783.1
ATGGCAACGAAATTTGAAAACTCGCTTGATATAGGCCTAGGACTTGGCCAATACAACAATATCAAAGATTCTTTCAAAGACTACAGACAAATATCAGCTAATAGTTGCTCAAGTAATGATATTCATAGCATTTCTCTGACTCTGGGCCTGTCATCTAGTCCAAAGAGCGAGGATTCTTCGATGTTGTCACATGTAATAACGAAGTGTGATGAATTTGTTGAAGAGTTAGGAAGAAAGAAGCTTAGGCTTAGTAAGGAGCAATCCAGGCTTTTGGAGGATAGGTTTAAAGAGCATTCCACTCTTAATCCTGTATGTATTGCTTCAGttttttcttttaatccttttttttccttatttatttattgaatgtatatatacTGACCATGACTTCATTTGTCTGAATGAAGAAACAAAAGCAAGCTCTTGCCAAGCATTTGAATCTACAGCCTCGGCAGATAGAAGTTTGGTTCCAGAACAGAAGGGCAAGGTTGGTGTTTTTACAAATCAGTCACACGATTATGTGTTATTAATGCCCCAATCCTAATGGCAATGAGTTATTAACACATATCCACAATTAGCTAAACCGAAATTCAGAATTTTAGATGGATTGTTTCTGTtgattaaatcaatataatttggTTTAGTTTTTGATAATATATTCCAAGTCGTGTTAGTTTGAATCAGTTTTATTTTTCCTGAAAACAAGCATGGAATTTTTCATGATTGTTATAATGCATATAAGGAGCAGTATTTACTTTAATAATGTTTATCTGCTTATGGGTAATGACTTTCGTATATATTGGGATTCATATCGTCCACCTACCATGACAAAATTCctagtatgaaatttattttattgtatagcTAAGGAATGATATGTTAATTCAGGGTTATTAGTTTAGTGTGGAAAACTAAAATACTACAAATAATCCATGGTCACAAAATTATATTTGGATTTAGTGAAATGCATTCAGATATACTGTTCTGATATGAAACATGCATTTTGGATCTGaccattttgatatatttattcctATTTGAATGTTGACTCTCATATATTTCCATGAAAAATAAGCACtattttatgacaaattaaattaGCTGTCTTTTTATAAGATTTTCACCAACTAAACATAACTTTCTTCGAATTGCAGAACAAAGCTCAAGCAAACAGAGGTCGACCGAGAATTTTACAAAAAATGCTACGACAAGTTAACTGAAGAAAACAAGAGACTGAAAACTGAGCTGGAAGAGATGAGGAAAATGAAAATGTCCTCTCCATTGGCAATGCACCTTCCAATAGCGCCCTCCATTACAGTGTGCCCTTCATGCCAATGTGTTAACGGAGCGAGCGAAGTACCCGTTACCGTTGGACATACCCCTCAGTTCTTGAACAATAATAATGCATTTGCAAAGCCAACACAatgctaa

Functional annotation

Database	accession number	e-value	annotation
nr	THU64797.1	1.8e-38	hypothetical protein C4D60_Mb01t30240
Swissprot	P46604.1	1.3e-36	Homeodomain-leucine zipper protein HAT22
trEMBL	A0A834ZIP0	1.6e-39	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G37790.1	68.42	7e-42	167	HAT22	Homeobox-leucine zipper protein family

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G04783	AT5G06710.1	124	41	1	78	201	189	311	66.13	4e-42	167
Asa4G04783	AT4G37790.1	114	35	1	77	190	124	236	68.42	7e-42	167
Asa4G04783	AT2G22800.1	114	39	1	77	190	111	223	64.91	1e-39	159

Ortholog group

Species	Genes
Allium cepa	g267031.t1
Allium fistulosum	AfisC5G06758; AfisC5G06760; AfisC5G06805
Allium sativum	Asa4G04783.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	78	132	57.7	6.8e-16

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network