Detail information of Asa4G04892


Location
GeneChrStartEndStrand
Asa4G04892chr413339744971333987663+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA52948.11.1e-105Cyclin-dependent kinase C-2
SwissprotQ5JK68.13.6e-106Cyclin-dependent kinase C-2
trEMBLA0A2I0ABM57.8e-106Cyclin-dependent kinase C-2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G10270.187.081e-104 375CDKC;1cyclin-dependent kinase C;1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag272544.t1
Allium fistulosumAfisC2G01767
Allium sativumAsa1G02051.1; Asa3G00077.1; Asa4G04892.1
Arabidopsis thalianaAT5G10270.1; AT5G64960.1; AT5G64960.2
Oryza sativaLOC_Os01g72790.1; LOC_Os05g32360.1; LOC_Os08g35220.1; LOC_Os08g35220.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain1209183.15.5e-54

Gene Ontology
AccessionOntologyName
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0005524FATP binding
GO:0006468Pprotein phosphorylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08819CDK12_13; cyclin-dependent kinase 12/13EC:2.7.11.22 2.7.11.23 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.