result

Gene information

Detail information of Asa4G05278

Location

Gene	Chr	Start	End	Strand
Asa4G05278	chr4	1433714056	1433715526	-

Sequences

CDS

>Asa4G05278.1
ATGGAAGCGTCAATGGTCAGCGGCGGCAGCGGAGGCGGAGGACCAGCTCCGTTTCTGTTAAAGACTTACGAGATGGTCGACGATTCTTCGACTGACGACATCGTCTCATGGAGCGACGCAAGCAACAGCTTCGTAGTCTGGAACCCTCCCGAATTTGCCGCCAGGTTACTTCCTACTTATTTCAAGCACAATAATTTCTCCAGCTTCATCCGCCAGCTCAACACTTATGGTTTTCGCAAAATAGACCCTGAGCGGTGGGAATTCGCAAACGATGAGTTTGTAAGGAATCAGAAACATTTACTGAAGAACATACATCGTCGAAAACCAATACATAGCCACAGTAATCCCTCTGGCAGTGCGGGATTGGTTCAATCTGGGTCGCTGGATCCTGAGAGGATTGCATTGGAAGAAGAGATTGATAGGCTATCACGAGAAAAGGCGACGCTTGCGAATGATTTGTGGAGGTTTAAACAGCAGCAGTCTGGAACAAAAGCTCAACTGGATGATCTTGAGAGAAGATTGTTCGATATTGAACAAAGACAGGCGAAGATGATTGAATTTTTTGAGAAGGCAGTGTTGAATCCTAAGTTTGTTGATAATTTGATTAAGATTGCTGGATCTGGAGCTGCAGATTTTGTTAATTTGCATAAAAGGAGAAGGTTACCTCCATTGGGTTTGGATTATTGCTTGGAAGCAGGAGACAATAGTACTAATTTTTACGATAATAATGGCAGTACTAGTAATACACCAAAACATGATGCTGGGCAAGTGTTTAATCAAGATTTTTCCGATAAACTGAAGCTTGGGCTGTGTCCTGCAGCAATTTCTGATGGTAATAACATTCTTGGTGCTACTAGTACTACATACAGCTCCAGTGAAAGAGTTGAGCAGAGTAAAATAAGCGGAGGAAAATTGGAGTTTCTTTCGTTTGTACCAGATGCTTTAGAGCTAAAGGACACAGGTACTTCTGTCTGTCCTATGAAAAAGCGTTCTGAATCGATTGACGATGAGGATGAGATGATACTTTGTCAGTTAAACCTTACTCTTGCATCTTCACCCATGCAAGTGGACAGGAGTGGTACTGCAGGCAAGACTCGAGGTTCTATGCCTGGAGAAAGTGAAACAGGGAACAAAGAGGAGGGCAATGGTGATAGAGAAATTTTGAAAAATCGAAGCGAGGTCGCTGCTAGTGAACTTAATGTAAAATCTTCTGCTCCAGCTGGGAGGGTGAATGATGTGTTCTGGGAGAAGTTCTTGACTGAAAGCCCAGGTCCTTCGGACACTGAAGATGTTACGATATCGGACCATGGTGATGAACAAATAGAAGAAACAAAGAATGAGTCAAGCAGCATGCTGCAGAACAGGAAAGATATGGAGCAGCTGACACTGTAA

Protein

Gene

>Asa4G05278.1
ATGGAAGCGTCAATGGTCAGCGGCGGCAGCGGAGGCGGAGGACCAGCTCCGTTTCTGTTAAAGACTTACGAGATGGTCGACGATTCTTCGACTGACGACATCGTCTCATGGAGCGACGCAAGCAACAGCTTCGTAGTCTGGAACCCTCCCGAATTTGCCGCCAGGTTACTTCCTACTTATTTCAAGCACAATAATTTCTCCAGCTTCATCCGCCAGCTCAACACTTATGTACGACTGCATACGTAAATCGATTCACTTCTATCGCTCTTATTGTTGACTGATTCAATTATATGTTTTGACAATTTAGGGTTTTCGCAAAATAGACCCTGAGCGGTGGGAATTCGCAAACGATGAGTTTGTAAGGAATCAGAAACATTTACTGAAGAACATACATCGTCGAAAACCAATACATAGCCACAGTAATCCCTCTGGCAGTGCGGGATTGGTTCAATCTGGGTCGCTGGATCCTGAGAGGATTGCATTGGAAGAAGAGATTGATAGGCTATCACGAGAAAAGGCGACGCTTGCGAATGATTTGTGGAGGTTTAAACAGCAGCAGTCTGGAACAAAAGCTCAACTGGATGATCTTGAGAGAAGATTGTTCGATATTGAACAAAGACAGGCGAAGATGATTGAATTTTTTGAGAAGGCAGTGTTGAATCCTAAGTTTGTTGATAATTTGATTAAGATTGCTGGATCTGGAGCTGCAGATTTTGTTAATTTGCATAAAAGGAGAAGGTTACCTCCATTGGGTTTGGATTATTGCTTGGAAGCAGGAGACAATAGTACTAATTTTTACGATAATAATGGCAGTACTAGTAATACACCAAAACATGATGCTGGGCAAGTGTTTAATCAAGATTTTTCCGATAAACTGAAGCTTGGGCTGTGTCCTGCAGCAATTTCTGATGGTAATAACATTCTTGGTGCTACTAGTACTACATACAGCTCCAGTGAAAGAGTTGAGCAGAGTAAAATAAGCGGAGGAAAATTGGAGTTTCTTTCGTTTGTACCAGATGCTTTAGAGCTAAAGGACACAGGTACTTCTGTCTGTCCTATGAAAAAGCGTTCTGAATCGATTGACGATGAGGATGAGATGATACTTTGTCAGTTAAACCTTACTCTTGCATCTTCACCCATGCAAGTGGACAGGAGTGGTACTGCAGGCAAGACTCGAGGTTCTATGCCTGGAGAAAGTGAAACAGGGAACAAAGAGGAGGGCAATGGTGATAGAGAAATTTTGAAAAATCGAAGCGAGGTCGCTGCTAGTGAACTTAATGTAAAATCTTCTGCTCCAGCTGGGAGGGTGAATGATGTGTTCTGGGAGAAGTTCTTGACTGAAAGCCCAGGTCCTTCGGACACTGAAGATGTTACGATATCGGACCATGGTGATGAACAAATAGAAGAAACAAAGAATGAGTCAAGCAGCATGCTGCAGAACAGGAAAGATATGGAGCAGCTGACACTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	QBC36003.1	3.2e-133	heat shock transcription factor A5
Swissprot	Q6K6S5.1	9.3e-106	Heat stress transcription factor 6
trEMBL	A0A411JIC1	2.3e-133	Heat shock transcription factor A5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13980.1	45.64	3e-96	349	AT-HSFA5;HSFA5	winged-helix DNA-binding transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G05278	AT4G13980.1	482	187	16	18	463	24	466	45.64	3e-96	349
Asa4G05278	AT5G16820.2	465	262	16	17	462	27	468	34.62	9e-57	218
Asa4G05278	AT5G16820.1	465	262	16	17	462	27	468	34.62	9e-57	218

Ortholog group

Species	Genes
Allium cepa	g32164.t1
Allium fistulosum	AfisC5G06160
Allium sativum	Asa4G05278.1
Arabidopsis thaliana	AT4G13980.1
Oryza sativa	LOC_Os02g29340.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	18	107	107.7	3.2e-31

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009408	P	response to heat
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network